RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 KLF11O14901 512 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 PEX1O43933 1283 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 RSPH10BP0C881 870 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 DHRS4L1P0CG22 281 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 TRIM49P0CI25 452 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 TRIM49CP0CI26 452 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 SPATA31C1P0DKV0 1188 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 SMIM18P0DKX4 95 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 CDK4P11802 303 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 HIBADHP31937 336 aaKnown RBP11.8□□□□□ -0.52
PCAT29-201ENST00000558411 GTF2H1P32780 548 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 CD97P48960 835 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 CDK8P49336 464 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 ARL4CP56559 192 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 PPP4CP60510 307 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 GPSM2P81274 684 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 TBL3Q12788 808 aaKnown RBP11.8□□□□□ -0.52
PCAT29-201ENST00000558411 P3H1Q32P28 736 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 STXBP4Q6ZWJ1 553 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 SLC9A9Q8IVB4 645 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 MAP7D3Q8IWC1 876 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 BANPQ8N9N5 519 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 RBM15BQ8NDT2 890 aaKnown RBP11.8□□□□□ -0.52
PCAT29-201ENST00000558411 TCP10LQ8TDR4 215 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 SLC5A5Q92911 643 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 SLC4A9Q96Q91 983 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 DHRS4Q9BTZ2 278 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 VPS37BQ9H9H4 285 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 USP29Q9HBJ7 922 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 R3HDM2Q9Y2K5 976 aaKnown RBP11.8□□□□□ -0.52
PCAT29-201ENST00000558411 ZNF536O15090 1300 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 WTIPA6NIX2 430 aaPredicted RBP11.8□□□□□ -0.52
PCAT29-201ENST00000558411 ATP2A1O14983 1001 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 OR6B1O95007 311 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 SNHG28P0DPA3 235 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 STAT3P40763 770 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 MSLNQ13421 630 aaPredicted RBP11.8□□□□□ -0.52
PCAT29-201ENST00000558411 MORF4L2Q15014 288 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 SF3B3Q15393 1217 aaKnown RBP11.8□□□□□ -0.52
PCAT29-201ENST00000558411 BORAQ6PGQ7 559 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 ADGRD1Q6QNK2 874 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 RBM44Q6ZP01 1051 aaKnown RBP11.8□□□□□ -0.52
PCAT29-201ENST00000558411 FAM71AQ8IYT1 594 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 ZBED8Q8IZ13 594 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 ETNPPLQ8TBG4 499 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 GAB3Q8WWW8 586 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 JADE3Q92613 823 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 FAM81BQ96LP2 452 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 HERPUD2Q9BSE4 406 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 NMUR2Q9GZQ4 415 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 RBM38Q9H0Z9 239 aaKnown RBP11.8□□□□□ -0.52
PCAT29-201ENST00000558411 BTBD7Q9P203 1132 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 SEL1LQ9UBV2 794 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 CHORDC1Q9UHD1 332 aaPredicted RBP11.8□□□□□ -0.52
PCAT29-201ENST00000558411 ITGB1BP2Q9UKP3 347 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 DMTF1Q9Y222 760 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 CDK5RAP2Q96SN8 1893 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.79□□□□□ -0.52
PCAT29-201ENST00000558411 ARHGAP10A1A4S6 786 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 WDR91A4D1P6 747 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 VIL1P09327 827 aaKnown RBP11.79□□□□□ -0.52
PCAT29-201ENST00000558411 MYL2P10916 166 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 ZFXP17010 805 aaPredicted RBP11.79□□□□□ -0.52
PCAT29-201ENST00000558411 PHBP35232 272 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 EMP3P54852 163 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 GSTO1P78417 241 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 MMEL1Q495T6 779 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 SFT2D3Q587I9 215 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 KLHDC10Q6PID8 442 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 ARHGEF19Q8IW93 802 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 NUP93Q8N1F7 819 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 CERKQ8TCT0 537 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 ZNF526Q8TF50 670 aaPredicted RBP11.79□□□□□ -0.52
PCAT29-201ENST00000558411 MZB1Q8WU39 189 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 MKL1Q969V6 931 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 CYTH2Q99418 400 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 THTPAQ9BU02 230 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 PSTPIP2Q9H939 334 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 AGPAT3Q9NRZ7 376 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 THEGQ9P2T0 379 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 TUBGCP4Q9UGJ1 667 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 PLIN4Q96Q06 1357 aa11.79□□□□□ -0.52
PCAT29-201ENST00000558411 hCG_2014768A0A024R1R8 64 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 FAM170AA1A519 330 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 USP1O94782 785 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 FAM13AO94988 1023 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 SGPL1O95470 568 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 MAPK4P31152 587 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 FMO1Q01740 532 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 MPP3Q13368 585 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 KLHL38Q2WGJ6 581 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 EPC2Q52LR7 807 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 CC2D2BQ6DHV5 1058 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 ACAD10Q6JQN1 1059 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 DUS1LQ6P1R4 473 aaKnown RBP11.78□□□□□ -0.52
PCAT29-201ENST00000558411 RFX8Q6ZV50 586 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 TTC7BQ86TV6 843 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 MARVELD2Q8N4S9 558 aa11.78□□□□□ -0.52
PCAT29-201ENST00000558411 MRPS26Q9BYN8 205 aaKnown RBP11.78□□□□□ -0.52
PCAT29-201ENST00000558411 SHOC2Q9UQ13 582 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms