RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TNFSF9P41273 254 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 BRCC3P46736 316 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 LRRC63Q05C16 580 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 ELAVL2Q12926 359 aaKnown RBP11.09□□□□□ -0.63
TPM1-212ENST00000558347 KCNJ12Q14500 433 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 PTPN21Q16825 1174 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 SLC10A6Q3KNW5 377 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 TTI2Q6NXR4 508 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 DCLRE1AQ6PJP8 1040 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 RAD9BQ6WBX8 426 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 TRIM67Q6ZTA4 783 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 STXBP4Q6ZWJ1 553 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 ZNF720Q7Z2F6 126 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 GLIS3Q8NEA6 775 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 SCFD1Q8WVM8 642 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 ZNF707Q96C28 371 aaPredicted RBP11.09□□□□□ -0.63
TPM1-212ENST00000558347 BICD1Q96G01 975 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 MRPL44Q9H9J2 332 aaKnown RBP11.09□□□□□ -0.63
TPM1-212ENST00000558347 TBX20Q9UMR3 447 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 FHOD1Q9Y613 1164 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 SOWAHDA6NJG2 315 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 PODXLO00592 558 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 HNRNPDLO14979 420 aaKnown RBP11.09□□□□□ -0.63
TPM1-212ENST00000558347 FAM189A1O60320 539 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 N4BP1O75113 896 aaKnown RBP11.09□□□□□ -0.63
TPM1-212ENST00000558347 PAPLNO95428 1278 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 C1RP00736 705 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 PIGRP01833 764 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 FGFR3P22607 806 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 TKTP29401 623 aaKnown RBP11.09□□□□□ -0.63
TPM1-212ENST00000558347 MATR3P43243 847 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM1-212ENST00000558347 GTF2BQ00403 316 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 CREMQ03060 361 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 TERF2Q15554 542 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 ZBTB41Q5SVQ8 909 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 SLC39A4Q6P5W5 647 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 ZNF662Q6ZS27 426 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 TDRD5Q8NAT2 981 aaKnown RBP11.09□□□□□ -0.63
TPM1-212ENST00000558347 KREMEN2Q8NCW0 462 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 HDAC7Q8WUI4 952 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 DDX27Q96GQ7 796 aaKnown RBP11.09□□□□□ -0.63
TPM1-212ENST00000558347 DUSP9Q99956 384 aaKnown RBP11.09□□□□□ -0.63
TPM1-212ENST00000558347 FGFBP2Q9BYJ0 223 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 KCTD10Q9H3F6 313 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 PLEKHA4Q9H4M7 779 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 ABHD10Q9NUJ1 306 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 SLC38A7Q9NVC3 462 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 TBC1D7Q9P0N9 293 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 TUBGCP4Q9UGJ1 667 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 DPP7Q9UHL4 492 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 USTQ9Y2C2 406 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 PCDHB13Q9Y5F0 798 aa11.09□□□□□ -0.63
TPM1-212ENST00000558347 TMEM221A6NGB7 291 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 LGALS16A8MUM7 142 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 M0R296 226 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 ASGR2P07307 311 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 TUBBP07437 444 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 CASP14P31944 242 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 ABCD1P33897 745 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 LIG4P49917 911 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 CASP5P51878 434 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 PMS1P54277 932 aaKnown RBP11.08□□□□□ -0.64
TPM1-212ENST00000558347 BRD3Q15059 726 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 KNOP1Q1ED39 458 aaKnown RBP11.08□□□□□ -0.64
TPM1-212ENST00000558347 ZCWPW2Q504Y3 356 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 ZC2HC1CQ53FD0 456 aaPredicted RBP11.08□□□□□ -0.64
TPM1-212ENST00000558347 ANKRD40Q6AI12 368 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 RSPO2Q6UXX9 243 aaPredicted RBP11.08□□□□□ -0.64
TPM1-212ENST00000558347 CCDC149Q6ZUS6 474 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 MAP4K3Q8IVH8 894 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 ZDHHC14Q8IZN3 488 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 SMG7Q92540 1137 aaKnown RBP11.08□□□□□ -0.64
TPM1-212ENST00000558347 HVCN1Q96D96 273 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 IQCDQ96DY2 449 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 ASIC4Q96FT7 647 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 TSG101Q99816 390 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 DESI2Q9BSY9 194 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 RHOBTB2Q9BYZ6 727 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 IKZF4Q9H2S9 585 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 SMOC2Q9H3U7 446 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 WDR6Q9NNW5 1121 aaKnown RBP11.08□□□□□ -0.64
TPM1-212ENST00000558347 MTRRQ9UBK8 725 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 LIMD1Q9UGP4 676 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 CDC23Q9UJX2 597 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 FBXW11Q9UKB1 542 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 TRAF3IP3Q9Y228 551 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 HCN4Q9Y3Q4 1203 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 MYO10Q9HD67 2058 aa11.08□□□□□ -0.64
TPM1-212ENST00000558347 TTC26A0AVF1 554 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 CTAGE9A4FU28 777 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 TRIM49BA6NDI0 452 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 TISP43B9A030 160 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 ANKRD63C9JTQ0 380 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 PDXKO00764 312 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 ZMYND10O75800 440 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 GCNT3O95395 438 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 OR1D2P34982 312 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 HOXD13P35453 343 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 SIGLEC14Q08ET2 396 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 MTF1Q14872 753 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms