RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 HOXD10P28358 340 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 ACTR2P61160 394 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 USP10Q14694 798 aaKnown RBP14.57□□□□□ -0.08
SPG11-210ENST00000558319 APPL2Q8NEU8 664 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 GOLPH3Q9H4A6 298 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 LATS2Q9NRM7 1088 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 P4HBP07237 508 aaKnown RBP14.57□□□□□ -0.08
SPG11-210ENST00000558319 WLSQ5T9L3 541 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 IPMKQ8NFU5 416 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 CMTM5Q96DZ9 223 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 AGPAT1Q99943 283 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 SYBUQ9NX95 663 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 PLXNC1O60486 1568 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 ZNF200P98182 395 aaPredicted RBP14.57□□□□□ -0.08
SPG11-210ENST00000558319 PLEKHA8Q96JA3 519 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 PARVAQ9NVD7 372 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 MTO1Q9Y2Z2 717 aaKnown RBP14.57□□□□□ -0.08
SPG11-210ENST00000558319 ROBO2Q9HCK4 1378 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 DNALI1O14645 258 aaPredicted RBP14.57□□□□□ -0.08
SPG11-210ENST00000558319 GTF2H3Q13889 308 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 ZRANB3Q5FWF4 1079 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 LRRC34Q8IZ02 419 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 HES6Q96HZ4 224 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 VIPAS39Q9H9C1 493 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 AGPAT5Q9NUQ2 364 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 MAP3K20Q9NYL2 800 aaKnown RBP14.57□□□□□ -0.08
SPG11-210ENST00000558319 FAM153AQ9UHL3 310 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 RASSF9O75901 435 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 CAPN1P07384 714 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 ST8SIA6P61647 398 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 SHC4Q6S5L8 630 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 SAMD7Q7Z3H4 446 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 VN1R5Q7Z5H4 357 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 PDLIM2Q96JY6 352 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 PTPRHQ9HD43 1115 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 RAB6BQ9NRW1 208 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 ABI2Q9NYB9 513 aaPredicted RBP14.57□□□□□ -0.08
SPG11-210ENST00000558319 MCM8Q9UJA3 840 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 STAP1Q9ULZ2 295 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 KCNH4Q9UQ05 1017 aa14.57□□□□□ -0.08
SPG11-210ENST00000558319 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.56□□□□□ -0.08
SPG11-210ENST00000558319 TOMM70O94826 608 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 KLHL18O94889 574 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 KLHL2O95198 593 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 CRYMQ14894 314 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 MEI1Q5TIA1 1274 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 AGBL2Q5U5Z8 902 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 C3orf62Q6ZUJ4 267 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 SENP7Q9BQF6 1050 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 JPH1Q9HDC5 661 aaPredicted RBP14.56□□□□□ -0.08
SPG11-210ENST00000558319 ZC3H7BQ9UGR2 993 aaKnown RBP14.56□□□□□ -0.08
SPG11-210ENST00000558319 PRG3Q9Y2Y8 225 aaPredicted RBP14.56□□□□□ -0.08
SPG11-210ENST00000558319 CYP27B1O15528 508 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 NQO1P15559 274 aaKnown RBP14.56□□□□□ -0.08
SPG11-210ENST00000558319 SERPINB5P36952 375 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 CAPZA2P47755 286 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 LAMC2Q13753 1193 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 FAXCQ5TGI0 409 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 C10orf53Q8N6V4 93 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 MPP4Q96JB8 637 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 PDP2Q9P2J9 529 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 ARIH1Q9Y4X5 557 aaPredicted RBP14.56□□□□□ -0.08
SPG11-210ENST00000558319 STAT5BP51692 787 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 SPATA2Q9UM82 520 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 MYO3BQ8WXR4 1341 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 SNUPNO95149 360 aaKnown RBP14.56□□□□□ -0.08
SPG11-210ENST00000558319 CYBBP04839 570 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 DNAJB2P25686 324 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 ABCD1P33897 745 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 MCPH1Q8NEM0 835 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 ARHGEF3Q9NR81 526 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 DAPK2Q9UIK4 370 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 GIMAP8Q8ND71 665 aaPredicted RBP14.56□□□□□ -0.08
SPG11-210ENST00000558319 PIF1Q9H611 641 aa14.56□□□□□ -0.08
SPG11-210ENST00000558319 RPS6KA4O75676 772 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 PYGMP11217 842 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 PAX7P23759 505 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 ITPRIPL1Q6GPH6 555 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 JADE3Q92613 823 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 SGF29Q96ES7 293 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 SH3BP1Q9Y3L3 701 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 KDM5DQ9BY66 1539 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 NPTXRO95502 500 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 MAPK11Q15759 364 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 CHMP1BQ7LBR1 199 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 SRBD1Q8N5C6 995 aaKnown RBP14.55□□□□□ -0.08
SPG11-210ENST00000558319 ZNF614Q8N883 585 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 NOA1Q8NC60 698 aaKnown RBP14.55□□□□□ -0.08
SPG11-210ENST00000558319 LRRIQ3A6PVS8 624 aaPredicted RBP14.55□□□□□ -0.08
SPG11-210ENST00000558319 CELF2O95319 508 aaKnown RBP14.55□□□□□ -0.08
SPG11-210ENST00000558319 FAM107AO95990 144 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 C16orf72Q14CZ0 275 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 TRIM54Q9BYV2 358 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 TMEM39BQ9GZU3 492 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 IGKV5-2P06315 115 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 CDK17Q00537 523 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 EML3Q32P44 896 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 ANKS3Q6ZW76 656 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 HAUS6Q7Z4H7 955 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 APOBEC3FQ8IUX4 373 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms