RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 PICALMQ13492 652 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 KIF22Q14807 665 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 SF3B3Q15393 1217 aaKnown RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 GSTA3Q16772 222 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 ASPRV1Q53RT3 343 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 PCNX4Q63HM2 1172 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 CCDC174Q6PII3 467 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 KCTD1Q719H9 257 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 TXNRD3Q86VQ6 643 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 ARHGEF19Q8IW93 802 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 TPH2Q8IWU9 490 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 ZBED8Q8IZ13 594 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 NME8Q8N427 588 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 RIBC1Q8N443 379 aaPredicted RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 SLC25A41Q8N5S1 370 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 CCDC89Q8N998 374 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 BBOF1Q8ND07 529 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 MIPOL1Q8TD10 442 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 MORC4Q8TE76 937 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 MAML1Q92585 1016 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 OTUD5Q96G74 571 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 PRR11Q96HE9 360 aaPredicted RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 OLFM3Q96PB7 478 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 PCDHB18PQ96TA0 734 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 TUBB6Q9BUF5 446 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 KRT82Q9NSB4 513 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 ETNK2Q9NVF9 386 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 R3HDM2Q9Y2K5 976 aaKnown RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 ROBO3Q96MS0 1386 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 UMODL1Q5DID0 1318 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 EMSYQ7Z589 1322 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 B2RBV5 119 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 WNT10BO00744 389 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 RGL2O15211 777 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 MAGEB2O15479 319 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 SORBS3O60504 671 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 FKTNO75072 461 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 TCEA3O75764 348 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 DESP17661 470 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 AP2B1P63010 937 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 GSTO1P78417 241 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 MTM1Q13496 603 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 MYBPC3Q14896 1274 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 ZNF568Q3ZCX4 644 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 PLEKHG4Q58EX7 1191 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 MFSD14BQ5SR56 506 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 C1orf146Q5VVC0 180 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 KAZNQ674X7 775 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 SYDE1Q6ZW31 735 aaPredicted RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 SPATA24Q86W54 205 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 LRRC6Q86X45 466 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 ANKMY2Q8IV38 441 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 FAM178BQ8IXR5 827 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 TAB3Q8N5C8 712 aaPredicted RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 C12orf50Q8NA57 414 aaPredicted RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 CCDC110Q8TBZ0 833 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 DPF3Q92784 378 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 KAT5Q92993 513 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 MPP4Q96JB8 637 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 NR1H4Q96RI1 486 aaPredicted RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 NAP1L4Q99733 375 aaKnown RBP5.34□□□□□ -1.55
HMG20A-204ENST00000558288 ECSITQ9BQ95 431 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 SYT11Q9BT88 431 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 TSSK1BQ9BXA7 367 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 TMEM120AQ9BXJ8 343 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 DCLK3Q9C098 648 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 ANKRD2Q9GZV1 360 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 JMJD4Q9H9V9 463 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 USTQ9Y2C2 406 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 NEU2Q9Y3R4 380 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 NUMBLQ9Y6R0 609 aa5.34□□□□□ -1.55
HMG20A-204ENST00000558288 FRMPD4Q14CM0 1322 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 LAMB1P07942 1786 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 TTC36A6NLP5 189 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 GPR25O00155 361 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 FSCN2O14926 492 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 PRPF4O43172 522 aaKnown RBP eCLIP5.34□□□□□ -1.56
HMG20A-204ENST00000558288 PPP1R11O60927 126 aaPredicted RBP5.34□□□□□ -1.56
HMG20A-204ENST00000558288 SPATA31D3P0C874 917 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 RALAP11233 206 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 IMPDH2P12268 514 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 ANPEPP15144 967 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 MUTP22033 750 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 BTDP43251 543 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 IREB2P48200 963 aaKnown RBP5.34□□□□□ -1.56
HMG20A-204ENST00000558288 CDK7P50613 346 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 KDSRQ06136 332 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 BFSP1Q12934 665 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 TMED1Q13445 227 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 FASTKD3Q14CZ7 662 aaKnown RBP5.34□□□□□ -1.56
HMG20A-204ENST00000558288 TAF1CQ15572 869 aaPredicted RBP5.34□□□□□ -1.56
HMG20A-204ENST00000558288 SUPT20HL1Q3ZLR7 823 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 SH2D4BQ5SQS7 431 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 ISLR2Q6UXK2 745 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 SPATA31D4Q6ZUB0 917 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 MARK2Q7KZI7 788 aaKnown RBP5.34□□□□□ -1.56
HMG20A-204ENST00000558288 TTC7BQ86TV6 843 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 NOP9Q86U38 636 aaKnown RBP5.34□□□□□ -1.56
HMG20A-204ENST00000558288 SLC47A2Q86VL8 602 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms