RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 PPP2R5CQ13362 524 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 LAMC2Q13753 1193 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 ZNF267Q14586 743 aaPredicted RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 EZH2Q15910 746 aaKnown RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 BMT2Q1RMZ1 405 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 TUBB8Q3ZCM7 444 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 CCDC40Q4G0X9 1142 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 ZNF385CQ66K41 422 aaPredicted RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 DCAF15Q66K64 600 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 PDXDC1Q6P996 788 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 USP17L6PQ6QN14 398 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 RAD9BQ6WBX8 426 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 USP53Q70EK8 1073 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 OTOP3Q7RTS5 596 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 FRMD5Q7Z6J6 570 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 MTDHQ86UE4 582 aaKnown RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 GPBP1Q86WP2 473 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 ZC3H3Q8IXZ2 948 aaKnown RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 FAM156AQ8NDB6 213 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 NEK11Q8NG66 645 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 DEPTORQ8TB45 409 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 WHAMMQ8TF30 809 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 DIO2Q92813 273 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 ZBED3Q96IU2 234 aaPredicted RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 CCDC140Q96MF4 163 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 PPM1MQ96MI6 270 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 NACC1Q96RE7 527 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 MYLK2Q9H1R3 596 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 SEMA6BQ9H3T3 888 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 SLC39A2Q9NP94 309 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 OLFML3Q9NRN5 406 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 WHRNQ9P202 907 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 RNF14Q9UBS8 474 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 ODF2LQ9ULJ1 636 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 SLC45A1Q9Y2W3 748 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 EMC9Q9Y3B6 208 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 PCDHGA9Q9Y5G4 932 aaKnown RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 PCDHGA8Q9Y5G5 932 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 PCDHGA7Q9Y5G6 932 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 PCDHGA6Q9Y5G7 932 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 PCDHGA3Q9Y5H0 932 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 PCDHGA2Q9Y5H1 932 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 ATP8B3O60423 1300 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 GTPBP10A4D1E9 387 aaKnown RBP7.77□□□□□ -1.17
MARK3-212ENST00000558223 TRIM49BA6NDI0 452 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 A6NNZ2 444 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 DCDC2CA8MYV0 355 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 B4DLN1 442 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 TCP10L2B9ZVM9 353 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 PSMD14O00487 310 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 TBCAO75347 108 aaKnown RBP7.77□□□□□ -1.17
MARK3-212ENST00000558223 ERLIN1O75477 346 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 F11P03951 625 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 ICAM1P05362 532 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 CCDC172P0C7W6 258 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 SLURP2P0DP57 97 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 FCER1AP12319 257 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 PRLRP16471 622 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 EIF2AK2P19525 551 aaKnown RBP7.77□□□□□ -1.17
MARK3-212ENST00000558223 EPS15P42566 896 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 SLC12A3P55017 1021 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 GPS2Q13227 327 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 EPHA7Q15375 998 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 KNOP1Q1ED39 458 aaKnown RBP7.77□□□□□ -1.17
MARK3-212ENST00000558223 SLC9C1Q4G0N8 1177 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 ZCWPW2Q504Y3 356 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 CEP55Q53EZ4 464 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 FAM133BQ5BKY9 247 aaKnown RBP7.77□□□□□ -1.17
MARK3-212ENST00000558223 ZNF569Q5MCW4 686 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 ABHD17CQ6PCB6 329 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 TMCO3Q6UWJ1 677 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 CYFIP1Q7L576 1253 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 DYMQ7RTS9 669 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 CACNA2D4Q7Z3S7 1137 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 KIAA1328Q86T90 577 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 SLC51AQ86UW1 340 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 TTC30BQ8N4P2 665 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 RNF10Q8N5U6 811 aaKnown RBP7.77□□□□□ -1.17
MARK3-212ENST00000558223 MSL3Q8N5Y2 521 aaKnown RBP7.77□□□□□ -1.17
MARK3-212ENST00000558223 ZBTB34Q8NCN2 500 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 TRIM58Q8NG06 486 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 RUBCNQ92622 972 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 SLC5A5Q92911 643 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 ACSF2Q96CM8 615 aaPredicted RBP7.77□□□□□ -1.17
MARK3-212ENST00000558223 ALS2CR12Q96Q35 445 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 IWS1Q96ST2 819 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 ACO2Q99798 780 aaKnown RBP7.77□□□□□ -1.17
MARK3-212ENST00000558223 TTYH3Q9C0H2 523 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 WDR12Q9GZL7 423 aaKnown RBP7.77□□□□□ -1.17
MARK3-212ENST00000558223 KIAA1683Q9H0B3 1180 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 RSAD1Q9HA92 442 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 CYP26B1Q9NR63 512 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 RRN3Q9NYV6 651 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 CEP72Q9P209 647 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 FBXL5Q9UKA1 691 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 FRMD4BQ9Y2L6 1034 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 AFG3L2Q9Y4W6 797 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 PCDHGB6Q9Y5F9 930 aa7.77□□□□□ -1.17
MARK3-212ENST00000558223 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.77□□□□□ -1.17
MARK3-212ENST00000558223 BAZ2BQ9UIF8 2168 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms