RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 MCOLN2Q8IZK6 566 aa21.72■■□□□ 1.07
SNRPA1-205ENST00000558036 C1orf131Q8NDD1 294 aaKnown RBP21.72■■□□□ 1.07
SNRPA1-205ENST00000558036 CAPZA3Q96KX2 299 aa21.72■■□□□ 1.07
SNRPA1-205ENST00000558036 TSPAN18Q96SJ8 248 aa21.72■■□□□ 1.07
SNRPA1-205ENST00000558036 PAAF1Q9BRP4 392 aa21.72■■□□□ 1.07
SNRPA1-205ENST00000558036 C11orf70Q9BRQ4 267 aa21.72■■□□□ 1.07
SNRPA1-205ENST00000558036 CASTOR2A6NHX0 329 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 HSPA8P11142 646 aaKnown RBP21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 LILRA4P59901 499 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 IFI16Q16666 785 aaKnown RBP21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 ECHDC2Q86YB7 292 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 C12orf29Q8N999 325 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 HEXIM2Q96MH2 286 aaKnown RBP21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 TSPYL2Q9H2G4 693 aaPredicted RBP21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 CNOT8Q9UFF9 292 aaKnown RBP21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 SNX12Q9UMY4 172 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 PDCD11Q14690 1871 aaKnown RBP21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 PAEPP09466 180 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 RRM1P23921 792 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 TAF6P49848 677 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 CLCNKBP51801 687 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 LBX1P52954 281 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 DENND1BQ6P3S1 775 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 TRIM72Q6ZMU5 477 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 MMS22LQ6ZRQ5 1243 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 MON1BQ7L1V2 547 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 COG1Q8WTW3 980 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 ZNF560Q96MR9 790 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 NUP85Q9BW27 656 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 CRISPLD2Q9H0B8 497 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 RGS18Q9NS28 235 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 GTF3C4Q9UKN8 822 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 MYH10P35580 1976 aa21.71■■□□□ 1.07
SNRPA1-205ENST00000558036 CYP1A2P05177 515 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 LRPAP1P30533 357 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 BFSP2Q13515 415 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 MEI1Q5TIA1 1274 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 RHOT2Q8IXI1 618 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 WDTC1Q8N5D0 677 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 BTBD6Q96KE9 485 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 SLC38A7Q9NVC3 462 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 TERF1P54274 439 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 FBXO46Q6PJ61 603 aaPredicted RBP21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 SLC39A5Q6ZMH5 540 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 ACOT1Q86TX2 421 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 OR6B3Q8NGW1 331 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 SCLYQ96I15 445 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 LPIN3Q9BQK8 851 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 NT5C1AQ9BXI3 368 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 ADAM22Q9P0K1 906 aa21.7■■□□□ 1.06
SNRPA1-205ENST00000558036 C9IYK1 514 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 FGFR1P11362 822 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 PNPLA4P41247 253 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 TRIM60Q495X7 471 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 SV2CQ496J9 727 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 ZNF598Q86UK7 904 aaKnown RBP21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 C3orf58Q8NDZ4 430 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 MNS1Q8NEH6 495 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 DBF4BQ8NFT6 615 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 KBTBD7Q8WVZ9 684 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 PGBD4Q96DM1 585 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 DPEP3Q9H4B8 488 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 L1RE1Q9UN81 338 aa21.69■■□□□ 1.06
SNRPA1-205ENST00000558036 TMEM110-MUSTN1A8MSY1 372 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 PDGFRBP09619 1106 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 GTF2F1P35269 517 aaKnown RBP eCLIP21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 SLC24A5Q71RS6 500 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 SLFN11Q7Z7L1 901 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 ZNF564Q8TBZ8 553 aaPredicted RBP21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 OSBPL9Q96SU4 736 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 SEZ6LQ9BYH1 1024 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 PPP1R12CQ9BZL4 782 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 TRIM7Q9C029 511 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 GDAP2Q9NXN4 497 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 CYTH4Q9UIA0 394 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 PCDHGC3Q9UN70 934 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 LMO2P25791 158 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 CCL23P55773 120 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 TLE2Q04725 743 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 FAAP100Q0VG06 881 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 PTP4A2Q12974 167 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 PEX26Q7Z412 305 aa21.68■■□□□ 1.06
SNRPA1-205ENST00000558036 PODXLO00592 558 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 CTIFO43310 598 aaKnown RBP21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 CDR1P51861 262 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 TCTN1Q2MV58 587 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 PAN2Q504Q3 1202 aaKnown RBP21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 PHF13Q86YI8 300 aaPredicted RBP21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 TMEM35BQ8NCS4 154 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 APPL2Q8NEU8 664 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 FAM49BQ9NUQ9 324 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 SMARCAL1Q9NZC9 954 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 A8MXQ7 604 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 O00370 1275 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 PITPNM1O00562 1244 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 MED7O43513 233 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 MICAL2O94851 1124 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 GJB6O95452 261 aa21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 LSM8O95777 96 aaKnown RBP21.67■■□□□ 1.06
SNRPA1-205ENST00000558036 SKIP12755 728 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms