RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 HNRNPDLO14979 420 aaKnown RBP12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 ECE2O60344 883 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 ZBED4O75132 1171 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 KRT1P04264 644 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 KRT4P19013 534 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 GARTP22102 1010 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 JAK3P52333 1124 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 GEMIN4P57678 1058 aaKnown RBP12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 MCL1Q07820 350 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 PDIA2Q13087 525 aaKnown RBP12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 MUM1Q2TAK8 710 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 BRDTQ58F21 947 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 EFHC2Q5JST6 749 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 RNASEH2BQ5TBB1 312 aaKnown RBP12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 C15orf39Q6ZRI6 1047 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 CLNKQ7Z7G1 428 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 PASD1Q8IV76 773 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 ABRAQ8N0Z2 381 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 RBBP8NLQ8NC74 664 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 FEZF2Q8TBJ5 459 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 SENP7Q9BQF6 1050 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 FAM213AQ9BRX8 229 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 FBXO28Q9NVF7 368 aa12.47□□□□□ -0.41
VIPAS39-211ENST00000557658 DPPA5A6NC42 116 aa12.46□□□□□ -0.41
VIPAS39-211ENST00000557658 CCDC22O60826 627 aa12.46□□□□□ -0.41
VIPAS39-211ENST00000557658 ETS1P14921 441 aa12.46□□□□□ -0.41
VIPAS39-211ENST00000557658 PHBP35232 272 aa12.46□□□□□ -0.41
VIPAS39-211ENST00000557658 C1QBPQ07021 282 aaKnown RBP12.46□□□□□ -0.41
VIPAS39-211ENST00000557658 KLC1Q07866 573 aa12.46□□□□□ -0.41
VIPAS39-211ENST00000557658 SUPT20HQ8NEM7 779 aa12.46□□□□□ -0.41
VIPAS39-211ENST00000557658 AGBL1Q96MI9 1066 aa12.46□□□□□ -0.41
VIPAS39-211ENST00000557658 NTPCRQ9BSD7 190 aaKnown RBP12.46□□□□□ -0.41
VIPAS39-211ENST00000557658 PARVAQ9NVD7 372 aa12.46□□□□□ -0.41
VIPAS39-211ENST00000557658 FETUBQ9UGM5 382 aa12.46□□□□□ -0.41
VIPAS39-211ENST00000557658 ENO4A6NNW6 628 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 WDR64B1ANS9 1081 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 HLA-DRAP01903 254 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 ICAM1P05362 532 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 PDHA1P08559 390 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 FGFR1P11362 822 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 RXRBP28702 533 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 GNA15P30679 374 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 VCPP55072 806 aaKnown RBP12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 LBRQ14739 615 aaKnown RBP12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 CCDC6Q16204 474 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 MAPK6Q16659 721 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 C11orf91Q3C1V1 193 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 ATP13A4Q4VNC1 1196 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 ZC3H12AQ5D1E8 599 aaKnown RBP12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 MFSD7Q6UXD7 560 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 C4orf50Q6ZRC1 276 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 MCF2L2Q86YR7 1114 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 ZNF516Q92618 1163 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 BICD1Q96G01 975 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 C17orf75Q9HAS0 396 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 PCDHB4Q9Y5E5 795 aa12.46□□□□□ -0.42
VIPAS39-211ENST00000557658 MYH9P35579 1960 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 HAUS5O94927 633 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 CFHP08603 1231 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 ADRA1DP25100 572 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 SFNP31947 248 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 VHLP40337 213 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 PIK3CAP42336 1068 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 NOP14P78316 857 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 MRPS9P82933 396 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 MXRA7P84157 204 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 HIF1AQ16665 826 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 CTC1Q2NKJ3 1217 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 SPOCD1Q6ZMY3 1216 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 PCGF5Q86SE9 256 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 NLRX1Q86UT6 975 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 SAMD3Q8N6K7 520 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 BSNDQ8WZ55 320 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 FAM84AQ96KN4 292 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 PRMT6Q96LA8 375 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 FNBP1Q96RU3 617 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 SH3GL3Q99963 347 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 PCDH9Q9HC56 1237 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 TMOD2Q9NZR1 351 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 NFIBO00712 420 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 TM9SF1O15321 606 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 NVLO15381 856 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 TNNI1P19237 187 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 ACO1P21399 889 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 SGSM1Q2NKQ1 1148 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 ZACNQ401N2 412 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 LRRC38Q5VT99 294 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 LMBRD2Q68DH5 695 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 TMEM270Q6UE05 265 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 ANKMY2Q8IV38 441 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 ALKBH8Q96BT7 664 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 MASTLQ96GX5 879 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 MIPEPQ99797 713 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 BTBD10Q9BSF8 475 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 CADM1Q9BY67 442 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 TRIM55Q9BYV6 548 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 ADAM33Q9BZ11 813 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 DCTN4Q9UJW0 460 aa12.45□□□□□ -0.42
VIPAS39-211ENST00000557658 WDR91A4D1P6 747 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms