RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 GLYCTKQ8IVS8 523 aa16.36■□□□□ 0.21
NEDD1-213ENST00000557644 RTP3Q9BQQ7 232 aa16.36■□□□□ 0.21
NEDD1-213ENST00000557644 LSM14BQ9BX40 385 aaKnown RBP16.36■□□□□ 0.21
NEDD1-213ENST00000557644 BCO2Q9BYV7 579 aa16.36■□□□□ 0.21
NEDD1-213ENST00000557644 XPO4Q9C0E2 1151 aaKnown RBP16.36■□□□□ 0.21
NEDD1-213ENST00000557644 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.36■□□□□ 0.21
NEDD1-213ENST00000557644 P4HA1P13674 534 aa16.36■□□□□ 0.21
NEDD1-213ENST00000557644 CD58P19256 250 aa16.36■□□□□ 0.21
NEDD1-213ENST00000557644 LMO2P25791 158 aa16.36■□□□□ 0.21
NEDD1-213ENST00000557644 PIK3R5Q8WYR1 880 aa16.36■□□□□ 0.21
NEDD1-213ENST00000557644 FAM207AQ9NSI2 230 aaPredicted RBP16.36■□□□□ 0.21
NEDD1-213ENST00000557644 STK39Q9UEW8 545 aa16.36■□□□□ 0.21
NEDD1-213ENST00000557644 AJAP1Q9UKB5 411 aaPredicted RBP16.36■□□□□ 0.21
NEDD1-213ENST00000557644 PRUNE2Q8WUY3 3088 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 C2orf71A6NGG8 1288 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 EPHB6O15197 1021 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 ADAM12O43184 909 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 OAZ2O95190 189 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 ACAT1P24752 427 aaKnown RBP16.35■□□□□ 0.21
NEDD1-213ENST00000557644 CUL2Q13617 745 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 PSMD5Q16401 504 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 DPH6Q7L8W6 267 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 MRPL43Q8N983 215 aaKnown RBP16.35■□□□□ 0.21
NEDD1-213ENST00000557644 OR10T2Q8NGX3 314 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 KREMEN1Q96MU8 473 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 ERGIC2Q96RQ1 377 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 TMEM209Q96SK2 561 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 UBE2TQ9NPD8 197 aaPredicted RBP16.35■□□□□ 0.21
NEDD1-213ENST00000557644 APEX2Q9UBZ4 518 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 HMGXB4Q9UGU5 601 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 DSEQ9UL01 958 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 GABRDO14764 452 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 PDGFRBP09619 1106 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 SMC1AQ14683 1233 aaKnown RBP16.35■□□□□ 0.21
NEDD1-213ENST00000557644 CTXN3Q4LDR2 81 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 ANKS3Q6ZW76 656 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 ADGRD2Q7Z7M1 963 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 METTL23Q86XA0 190 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 TMEM86AQ8N2M4 240 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 OR6B3Q8NGW1 331 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 MRPL38Q96DV4 380 aaKnown RBP16.35■□□□□ 0.21
NEDD1-213ENST00000557644 CLSTN3Q9BQT9 956 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 NGRNQ9NPE2 291 aaKnown RBP16.35■□□□□ 0.21
NEDD1-213ENST00000557644 DDX43Q9NXZ2 648 aaKnown RBP16.35■□□□□ 0.21
NEDD1-213ENST00000557644 FBXL5Q9UKA1 691 aa16.35■□□□□ 0.21
NEDD1-213ENST00000557644 SPTBN5Q9NRC6 3674 aaKnown RBP16.35■□□□□ 0.21
NEDD1-213ENST00000557644 TACC1O75410 805 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 CNPP09543 421 aaKnown RBP16.34■□□□□ 0.21
NEDD1-213ENST00000557644 OR4Q2P0C623 313 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 ORC1Q13415 861 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 CCDC142Q17RM4 750 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 DEFB123Q8N688 67 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 PCMTD1Q96MG8 357 aaPredicted RBP16.34■□□□□ 0.21
NEDD1-213ENST00000557644 LMAN2LQ9H0V9 348 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 MTRRQ9UBK8 725 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 CDY1Q9Y6F8 540 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 PRRC2BQ5JSZ5 2229 aaKnown RBP16.34■□□□□ 0.21
NEDD1-213ENST00000557644 TSC2P49815 1807 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 ARHGEF37A1IGU5 675 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 PER2O15055 1255 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 TEX28O15482 410 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 TBC1D4O60343 1298 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 NOL4O94818 638 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 WARSP23381 471 aaKnown RBP16.34■□□□□ 0.21
NEDD1-213ENST00000557644 GNL1P36915 607 aaPredicted RBP16.34■□□□□ 0.21
NEDD1-213ENST00000557644 KLHDC7AQ5VTJ3 777 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 ZNF280DQ6N043 979 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 GPR153Q6NV75 609 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 RBM23Q86U06 439 aaKnown RBP16.34■□□□□ 0.21
NEDD1-213ENST00000557644 CISHQ9NSE2 258 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 FHOD1Q9Y613 1164 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 IRAK3Q9Y616 596 aa16.34■□□□□ 0.21
NEDD1-213ENST00000557644 IGFBP4P22692 258 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 ARPP19P56211 112 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 PTPROQ16827 1216 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 ZNF394Q53GI3 561 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 TWNKQ96RR1 684 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 LPIN3Q9BQK8 851 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 SNX25Q9H3E2 840 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 DPEP3Q9H4B8 488 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 CYP3A43Q9HB55 503 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 STXBP5LQ9Y2K9 1186 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 ATP2C2O75185 946 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 UCHL3P15374 230 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 TBXAS1P24557 533 aaPredicted RBP16.33■□□□□ 0.2
NEDD1-213ENST00000557644 OR1D2P34982 312 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 LHX1P48742 406 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 NDST1P52848 882 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 PSMC1P62191 440 aaKnown RBP16.33■□□□□ 0.2
NEDD1-213ENST00000557644 GCNT1Q02742 428 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 BMS1Q14692 1282 aaKnown RBP16.33■□□□□ 0.2
NEDD1-213ENST00000557644 ARHGAP44Q17R89 818 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 IQCEQ6IPM2 695 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 GANQ9H2C0 597 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 RXFP1Q9HBX9 757 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 PLCB1Q9NQ66 1216 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 DNAJC12Q9UKB3 198 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 BACE2Q9Y5Z0 518 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 MTCH2Q9Y6C9 303 aa16.33■□□□□ 0.2
NEDD1-213ENST00000557644 ATG2AQ2TAZ0 1938 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms