RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 TPGS2Q68CL5 300 aa17.09■□□□□ 0.33
TUBB3-214ENST00000557490 THEM5Q8N1Q8 247 aa17.09■□□□□ 0.33
TUBB3-214ENST00000557490 ZNF707Q96C28 371 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-214ENST00000557490 FAM84AQ96KN4 292 aa17.09■□□□□ 0.33
TUBB3-214ENST00000557490 FRMD4BQ9Y2L6 1034 aa17.09■□□□□ 0.33
TUBB3-214ENST00000557490 PTPRJQ12913 1337 aa17.08■□□□□ 0.32
TUBB3-214ENST00000557490 WDR27A2RRH5 827 aa17.08■□□□□ 0.32
TUBB3-214ENST00000557490 XYLBO75191 536 aa17.08■□□□□ 0.32
TUBB3-214ENST00000557490 ABLIM3O94929 683 aa17.08■□□□□ 0.32
TUBB3-214ENST00000557490 PAPLNO95428 1278 aa17.08■□□□□ 0.32
TUBB3-214ENST00000557490 SP100P23497 879 aaPredicted RBP17.08■□□□□ 0.32
TUBB3-214ENST00000557490 RPL13P26373 211 aaKnown RBP17.08■□□□□ 0.32
TUBB3-214ENST00000557490 HOXA9P31269 272 aa17.08■□□□□ 0.32
TUBB3-214ENST00000557490 ZNF658Q5TYW1 1059 aaPredicted RBP17.08■□□□□ 0.32
TUBB3-214ENST00000557490 CEP135Q66GS9 1140 aa17.08■□□□□ 0.32
TUBB3-214ENST00000557490 FEZF2Q8TBJ5 459 aa17.08■□□□□ 0.32
TUBB3-214ENST00000557490 ERCC4Q92889 916 aaPredicted RBP17.08■□□□□ 0.32
TUBB3-214ENST00000557490 BORCS6Q96GS4 357 aa17.08■□□□□ 0.32
TUBB3-214ENST00000557490 AFF4Q9UHB7 1163 aaKnown RBP17.08■□□□□ 0.32
TUBB3-214ENST00000557490 SIX4Q9UIU6 781 aa17.08■□□□□ 0.32
TUBB3-214ENST00000557490 MAFFQ9ULX9 164 aa17.08■□□□□ 0.32
TUBB3-214ENST00000557490 ANK1P16157 1881 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 MED19A0JLT2 244 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-214ENST00000557490 CCL16O15467 120 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 HUS1O60921 280 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 ATF2P15336 505 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 NR2F2P24468 414 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 NBL1P41271 181 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 NFIL3Q16649 462 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 WSCD1Q658N2 575 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 OTOP3Q7RTS5 596 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 TRAPPC11Q7Z392 1133 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 SMYD4Q8IYR2 804 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-214ENST00000557490 TDRD5Q8NAT2 981 aaKnown RBP17.07■□□□□ 0.32
TUBB3-214ENST00000557490 CXorf38Q8TB03 319 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 SPATA20Q8TB22 786 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 ACSF2Q96CM8 615 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-214ENST00000557490 HPDLQ96IR7 371 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 CYP4F11Q9HBI6 524 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 WDR6Q9NNW5 1121 aaKnown RBP17.07■□□□□ 0.32
TUBB3-214ENST00000557490 POLIQ9UNA4 740 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 USTQ9Y2C2 406 aa17.07■□□□□ 0.32
TUBB3-214ENST00000557490 CEP250Q9BV73 2442 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 CLUHO75153 1309 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 PHACTR2O75167 634 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 LRG1P02750 347 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 POU2F2P09086 479 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 CASP4P49662 377 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 AP3M2P53677 418 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 ADCY1Q08828 1119 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 TRPC3Q13507 836 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 RNF19BQ6ZMZ0 732 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 TCEAL8Q8IYN2 117 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 IPO9Q96P70 1041 aaKnown RBP17.06■□□□□ 0.32
TUBB3-214ENST00000557490 TSG101Q99816 390 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 GDAP2Q9NXN4 497 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 SNX9Q9Y5X1 595 aa17.06■□□□□ 0.32
TUBB3-214ENST00000557490 C2CD4DB7Z1M9 353 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 MAPK13O15264 365 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 GALR2O43603 387 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-214ENST00000557490 OR4Q2P0C623 313 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 PRCPP42785 496 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 NUBP1P53384 320 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 GPR17Q13304 367 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 ADAM9Q13443 819 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 STIM1Q13586 685 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 EDRF1Q3B7T1 1238 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 COBLL1Q53SF7 1204 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 SCARA3Q6AZY7 606 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 TMEM86AQ8N2M4 240 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 PLCD3Q8N3E9 789 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 PDCL2Q8N4E4 241 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 TMC2Q8TDI7 906 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 PARD3BQ8TEW8 1205 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 MAN1B1Q9UKM7 699 aa17.05■□□□□ 0.32
TUBB3-214ENST00000557490 LRRIQ3A6PVS8 624 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-214ENST00000557490 SEC24AO95486 1093 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 KRT13P13646 458 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 PSMC2P35998 433 aaKnown RBP17.04■□□□□ 0.32
TUBB3-214ENST00000557490 BIRC3Q13489 604 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 ZCWPW2Q504Y3 356 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 GRASPQ7Z6J2 395 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-214ENST00000557490 FAM186BQ8IYM0 893 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 ZDHHC14Q8IZN3 488 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 ELMOD1Q8N336 334 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 TOP6BLQ8N6T0 577 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 OR10T2Q8NGX3 314 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 SPATA18Q8TC71 538 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 PLEKHO2Q8TD55 490 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 ZNF516Q92618 1163 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 PGLYRP2Q96PD5 576 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 ZCWPW1Q9H0M4 648 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 GZF1Q9H116 711 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-214ENST00000557490 L1RE1Q9UN81 338 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 INSL5Q9Y5Q6 135 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 BAHCC1Q9P281 2608 aa17.04■□□□□ 0.32
TUBB3-214ENST00000557490 CHD6Q8TD26 2715 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 CETN3O15182 167 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 CLSTN1O94985 981 aa17.03■□□□□ 0.32
TUBB3-214ENST00000557490 PDGFBP01127 241 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms