RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 GCAP28676 217 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 NAMPTP43490 491 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 TGFB2P61812 414 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 KCNT1Q5JUK3 1230 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 SYDE1Q6ZW31 735 aaPredicted RBP18.74■□□□□ 0.59
XRCC3-218ENST00000557439 PARVAQ9NVD7 372 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 ADGRA2Q96PE1 1338 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 TMEM191CA6NGB0 347 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 TMEM191BP0C7N4 346 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 MGAT5Q09328 741 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 DCUN1D2Q6PH85 259 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 ANKRD35Q8N283 1001 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 LRRC71Q8N4P6 559 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 PIM2Q9P1W9 311 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 ADAMTS5Q9UNA0 930 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 AFG3L2Q9Y4W6 797 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 LRRD1A4D1F6 860 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 UBA1P22314 1058 aaKnown RBP18.73■□□□□ 0.59
XRCC3-218ENST00000557439 PLCB3Q01970 1234 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 GPAT2Q6NUI2 795 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 CATSPERGQ6ZRH7 1159 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 ANKMY2Q8IV38 441 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 C4orf33Q8N1A6 199 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 WDTC1Q8N5D0 677 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 CEP120Q8N960 986 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 PRPF31Q8WWY3 499 aaKnown RBP18.73■□□□□ 0.59
XRCC3-218ENST00000557439 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.73■□□□□ 0.59
XRCC3-218ENST00000557439 DOCK1Q14185 1865 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 EXOC1LA0A1B0GW35 172 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 ZBTB7AO95365 584 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 POTEJP0CG39 1038 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 RAP1GAPP47736 663 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 NRLP54845 237 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 WDR4P57081 412 aaKnown RBP18.73■□□□□ 0.59
XRCC3-218ENST00000557439 C1QBPQ07021 282 aaKnown RBP18.73■□□□□ 0.59
XRCC3-218ENST00000557439 STXBP2Q15833 593 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.73■□□□□ 0.595e-6■■■■■ 45.5
XRCC3-218ENST00000557439 FITM2Q8N6M3 262 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 CDHR1Q96JP9 859 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 SCINQ9Y6U3 715 aa18.73■□□□□ 0.59
XRCC3-218ENST00000557439 A8MUI8 341 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 CDH16O75309 829 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 NCALDP61601 193 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 TFAMQ00059 246 aaKnown RBP18.72■□□□□ 0.59
XRCC3-218ENST00000557439 CAV1Q03135 178 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 WDR72Q3MJ13 1102 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 DNAJC24Q6P3W2 148 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 SPOCD1Q6ZMY3 1216 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 SPATA21Q7Z572 469 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 CNKSR2Q8WXI2 1034 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 ZWILCHQ9H900 591 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 AS3MTQ9HBK9 375 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 CISHQ9NSE2 258 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 H0YCG3 227 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 PKN2Q16513 984 aaKnown RBP18.72■□□□□ 0.59
XRCC3-218ENST00000557439 SLFN12LQ6IEE8 588 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 TRIM72Q6ZMU5 477 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 P3H4Q92791 437 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 ECT2Q9H8V3 914 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 VPS37BQ9H9H4 285 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 EURLQ9NYK6 297 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 IP6K2Q9UHH9 426 aa18.72■□□□□ 0.59
XRCC3-218ENST00000557439 ZNF132P52740 706 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 EFTUD2Q15029 972 aaKnown RBP eCLIP18.71■□□□□ 0.59
XRCC3-218ENST00000557439 THNSL1Q8IYQ7 743 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 ZBED8Q8IZ13 594 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 ZCCHC9Q8N567 271 aaKnown RBP18.71■□□□□ 0.59
XRCC3-218ENST00000557439 GPATCH11Q8N954 259 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 TRAPPC12Q8WVT3 735 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 MAML1Q92585 1016 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 PRCCQ92733 491 aaPredicted RBP18.71■□□□□ 0.59
XRCC3-218ENST00000557439 NXF1Q9UBU9 619 aaKnown RBP18.71■□□□□ 0.59
XRCC3-218ENST00000557439 POLIQ9UNA4 740 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 DNALI1O14645 258 aaPredicted RBP18.71■□□□□ 0.59
XRCC3-218ENST00000557439 MGRN1O60291 552 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 ATP6V1G2O95670 118 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 ASS1P00966 412 aaKnown RBP18.71■□□□□ 0.59
XRCC3-218ENST00000557439 TBXAS1P24557 533 aaPredicted RBP18.71■□□□□ 0.59
XRCC3-218ENST00000557439 ATP5DP30049 168 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 GDF10P55107 478 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 LY6KQ17RY6 165 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 TREML2Q5T2D2 321 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 SYCP2LQ5T4T6 812 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 EMC1Q8N766 993 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 ANKLE1Q8NAG6 615 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 IMPG2Q9BZV3 1241 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 SLCO1B3Q9NPD5 702 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 GRID1Q9ULK0 1009 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 CNTN6Q9UQ52 1028 aa18.71■□□□□ 0.59
XRCC3-218ENST00000557439 SGK1O00141 431 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 PIGRP01833 764 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 TAC1P20366 129 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 RDXP35241 583 aaKnown RBP18.7■□□□□ 0.58
XRCC3-218ENST00000557439 DNAJC3Q13217 504 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 DCAF15Q66K64 600 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 UBR7Q8N806 425 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 JOSD2Q8TAC2 188 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 TRPM4Q8TD43 1214 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 VCPIP1Q96JH7 1222 aa18.7■□□□□ 0.58
XRCC3-218ENST00000557439 NOD2Q9HC29 1040 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms