RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 YWHAHQ04917 246 aaPredicted RBP13.68□□□□□ -0.22
PSEN1-221ENST00000557293 MAPK7Q13164 816 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 PLD1Q13393 1074 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 RUNX3Q13761 415 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 TRIM68Q6AZZ1 485 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 MPZL3Q6UWV2 235 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 TMEM150AQ86TG1 271 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 DIS3L2Q8IYB7 885 aaKnown RBP13.68□□□□□ -0.22
PSEN1-221ENST00000557293 HHIPQ96QV1 700 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 OXCT2Q9BYC2 517 aaPredicted RBP13.68□□□□□ -0.22
PSEN1-221ENST00000557293 MRPL4Q9BYD3 311 aaKnown RBP13.68□□□□□ -0.22
PSEN1-221ENST00000557293 HAPLN2Q9GZV7 340 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 BHMT2Q9H2M3 363 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 EBF1Q9UH73 591 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 CITO14578 2027 aa13.68□□□□□ -0.22
PSEN1-221ENST00000557293 OR6C75A6NL08 312 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 CCDC169A6NNP5 214 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 SOBPA7XYQ1 873 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 PATE3B3GLJ2 98 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 TAF4O00268 1085 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 EPB41L2O43491 1005 aaKnown RBP13.67□□□□□ -0.22
PSEN1-221ENST00000557293 REC8O95072 547 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 LARGE1O95461 756 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 CAPNS1P04632 268 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 CREB5Q02930 508 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 SPAG1Q07617 926 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 GRSF1Q12849 480 aaKnown RBP eCLIP13.67□□□□□ -0.22
PSEN1-221ENST00000557293 MYBPC2Q14324 1141 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 DAB2IPQ5VWQ8 1189 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 LPIN3Q9BQK8 851 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 TCHPQ9BT92 498 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 EBF3Q9H4W6 596 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 TBX20Q9UMR3 447 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 LHX6Q9UPM6 363 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 CCL26Q9Y258 94 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 INVSQ9Y283 1065 aa13.67□□□□□ -0.22
PSEN1-221ENST00000557293 PHLPP2Q6ZVD8 1323 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 TTC26A0AVF1 554 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 PPEF2O14830 753 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 RHOBTB1O94844 696 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 FGF19O95750 216 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 ARSAP15289 507 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 ATF6P18850 670 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 U2AF2P26368 475 aaKnown RBP eCLIP13.66□□□□□ -0.22
PSEN1-221ENST00000557293 GUCY2FP51841 1108 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 CDR1P51861 262 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 IRX4P78413 519 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 ARHGAP15Q53QZ3 475 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 SYT13Q7L8C5 426 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 CMTM8Q8IZV2 173 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 C4orf32Q8N8J7 132 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 WASF1Q92558 559 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 USP13Q92995 863 aaPredicted RBP13.66□□□□□ -0.22
PSEN1-221ENST00000557293 NTPCRQ9BSD7 190 aaKnown RBP13.66□□□□□ -0.22
PSEN1-221ENST00000557293 BRMS1Q9HCU9 246 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 THG1LQ9NWX6 298 aaKnown RBP13.66□□□□□ -0.22
PSEN1-221ENST00000557293 HSFX1Q9UBD0 423 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 PCNX2A6NKB5 2137 aa13.66□□□□□ -0.22
PSEN1-221ENST00000557293 NUP205Q92621 2012 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 ANTXRLA6NF34 631 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 HIP1RO75146 1068 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 F11P03951 625 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
PSEN1-221ENST00000557293 TYMPP19971 482 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 PTPAQ15257 358 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 ZNF174Q15697 407 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 ELF2Q15723 593 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 PMS2CLQ68D20 193 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 CENPQQ7L2Z9 268 aaPredicted RBP13.65□□□□□ -0.22
PSEN1-221ENST00000557293 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 OR10T2Q8NGX3 314 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 ERMNQ8TAM6 284 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 TMEM9BQ9NQ34 198 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 KIAA1024Q9UPX6 916 aa13.65□□□□□ -0.22
PSEN1-221ENST00000557293 RBM19Q9Y4C8 960 aaKnown RBP13.65□□□□□ -0.22
PSEN1-221ENST00000557293 ASCC3Q8N3C0 2202 aaKnown RBP13.64□□□□□ -0.23
PSEN1-221ENST00000557293 ANKRD11Q6UB99 2663 aaPredicted RBP13.64□□□□□ -0.23
PSEN1-221ENST00000557293 SFI1A8K8P3 1242 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 E9PMD0 336 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 SLC16A4O15374 487 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 HYAL3O43820 417 aaPredicted RBP13.64□□□□□ -0.23
PSEN1-221ENST00000557293 ADRB2P07550 413 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 CXCL8P10145 99 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 HMGA1P17096 107 aaKnown RBP13.64□□□□□ -0.23
PSEN1-221ENST00000557293 CYP3A5P20815 502 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 DRD1P21728 446 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 BCKDHBP21953 392 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 GJA4P35212 333 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 CCT6AP40227 531 aaKnown RBP13.64□□□□□ -0.23
PSEN1-221ENST00000557293 DMC1Q14565 340 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 OVOS1Q6IE37 1185 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 C1orf186Q6ZWK4 172 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 USP37Q86T82 979 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 ITIH5Q86UX2 942 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 LRRTM3Q86VH5 581 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 NSUN7Q8NE18 718 aaKnown RBP13.64□□□□□ -0.23
PSEN1-221ENST00000557293 DEFB124Q8NES8 71 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 RPLP0P6Q8NHW5 317 aa13.64□□□□□ -0.23
PSEN1-221ENST00000557293 ZCCHC14Q8WYQ9 949 aaKnown RBP13.64□□□□□ -0.23
PSEN1-221ENST00000557293 SENP8Q96LD8 212 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms