RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MLLT6P55198 1093 aaPredicted RBP9.49□□□□□ -0.89
VRK1-206ENST00000557222 MRPL58Q14197 206 aaKnown RBP9.49□□□□□ -0.89
VRK1-206ENST00000557222 UBXN2BQ14CS0 331 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 TCEAL8Q8IYN2 117 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 KIAA2013Q8IYS2 634 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 KCTD17Q8N5Z5 321 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 LEMD2Q8NC56 503 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 ATRIPQ8WXE1 791 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 SECISBP2LQ93073 1101 aaKnown RBP9.49□□□□□ -0.89
VRK1-206ENST00000557222 ACO2Q99798 780 aaKnown RBP9.49□□□□□ -0.89
VRK1-206ENST00000557222 LLPHQ9BRT6 129 aaKnown RBP9.49□□□□□ -0.89
VRK1-206ENST00000557222 CCDC94Q9BW85 323 aaPredicted RBP9.49□□□□□ -0.89
VRK1-206ENST00000557222 OXCT2Q9BYC2 517 aaPredicted RBP9.49□□□□□ -0.89
VRK1-206ENST00000557222 RAB34Q9BZG1 259 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 CXCL16Q9H2A7 254 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 PTPRHQ9HD43 1115 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 SPATA6Q9NWH7 488 aaPredicted RBP9.49□□□□□ -0.89
VRK1-206ENST00000557222 CACNA1BQ00975 2339 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 PRR5-ARHGAP8B1AHC4 643 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 LZTS3O60299 673 aaPredicted RBP9.48□□□□□ -0.89
VRK1-206ENST00000557222 JAK2O60674 1132 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 LARGE1O95461 756 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 LRG1P02750 347 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 EDN1P05305 212 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 MCF2P10911 925 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 TKTP29401 623 aaKnown RBP9.48□□□□□ -0.89
VRK1-206ENST00000557222 CCT6AP40227 531 aaKnown RBP9.48□□□□□ -0.89
VRK1-206ENST00000557222 SMTNP53814 917 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 NRLP54845 237 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 ARHGAP8P85298 464 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 ADCY1Q08828 1119 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 C4orf32Q8N8J7 132 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 HINFPQ9BQA5 517 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 KXD1Q9BQD3 176 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 NTPCRQ9BSD7 190 aaKnown RBP9.48□□□□□ -0.89
VRK1-206ENST00000557222 TIPINQ9BVW5 301 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 MRPL4Q9BYD3 311 aaKnown RBP9.48□□□□□ -0.89
VRK1-206ENST00000557222 EPC1Q9H2F5 836 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 BHMT2Q9H2M3 363 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 TRPV4Q9HBA0 871 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 PRMT8Q9NR22 394 aaPredicted RBP9.48□□□□□ -0.89
VRK1-206ENST00000557222 HCFC1R1Q9NWW0 138 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 MTF2Q9Y483 593 aaPredicted RBP9.48□□□□□ -0.89
VRK1-206ENST00000557222 TRIP11Q15643 1979 aa9.48□□□□□ -0.89
VRK1-206ENST00000557222 LAD1O00515 517 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 PODXLO00592 558 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 PRRG1O14668 218 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 DTNBO60941 627 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 LRRN2O75325 713 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 LIG1P18858 919 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 PROZP22891 400 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 TARSP26639 723 aaKnown RBP9.47□□□□□ -0.89
VRK1-206ENST00000557222 MSX1P28360 303 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 NEK4P51957 841 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 HMGN5P82970 282 aaKnown RBP9.47□□□□□ -0.89
VRK1-206ENST00000557222 ROR1Q01973 937 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 CSTF1Q05048 431 aaKnown RBP9.47□□□□□ -0.89
VRK1-206ENST00000557222 DMP1Q13316 513 aaPredicted RBP9.47□□□□□ -0.89
VRK1-206ENST00000557222 FZD5Q13467 585 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 NCOA4Q13772 614 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 PPP2R5DQ14738 602 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 ZNF174Q15697 407 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 PRSS36Q5K4E3 855 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 TTC38Q5R3I4 469 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 CYP4A22Q5TCH4 519 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 TANGO2Q6ICL3 276 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 C1orf228Q6PIY5 440 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 LYPD4Q6UWN0 246 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 TPRG1Q6ZUI0 275 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 ELMOD1Q8N336 334 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 IGSF22Q8N9C0 903 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 APPL2Q8NEU8 664 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 FBXO18Q8NFZ0 1043 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 DEPDC1BQ8WUY9 529 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 E2F7Q96AV8 911 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 MCRS1Q96EZ8 462 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 MSANTD3Q96H12 275 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 C8orf76Q96K31 380 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 SUSD3Q96L08 255 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 DRC1Q96MC2 740 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 ACAP3Q96P50 834 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 GPR88Q9GZN0 384 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 CDT1Q9H211 546 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 ZFP14Q9HCL3 533 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 CNTN3Q9P232 1028 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 ARHGAP28Q9P2N2 729 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 LRWD1Q9UFC0 647 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 AFF4Q9UHB7 1163 aaKnown RBP9.47□□□□□ -0.89
VRK1-206ENST00000557222 SERTAD1Q9UHV2 236 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 NOL7Q9UMY1 257 aaKnown RBP9.47□□□□□ -0.89
VRK1-206ENST00000557222 LIMCH1Q9UPQ0 1083 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 KIAA1024Q9UPX6 916 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 DNM3Q9UQ16 869 aa9.47□□□□□ -0.89
VRK1-206ENST00000557222 WDR27A2RRH5 827 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 SCP2P22307 547 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 PAX3P23760 479 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 BRCC3P46736 316 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 NPTX2P47972 431 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 EPHA5P54756 1037 aa9.46□□□□□ -0.9
VRK1-206ENST00000557222 PEX3P56589 373 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms