RNA–Protein interactions for RNA: ENST00000557157.5

HNRNPC-229, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-229ENST00000557157 MYRFLQ96LU7 910 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 ZNF317Q96PQ6 595 aaPredicted RBP4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 NUDCD1Q96RS6 583 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 USP28Q96RU2 1077 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 TCF12Q99081 682 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 HTATIP2Q9BUP3 242 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 LRMDAQ9H2I8 198 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 C7orf69Q9H7B7 122 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 C12orf10Q9HB07 376 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 PLGRKTQ9HBL7 147 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 RXFP1Q9HBX9 757 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 TCF7L2Q9NQB0 619 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 ZNF277Q9NRM2 450 aaPredicted RBP4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 KRT82Q9NSB4 513 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 RNF19AQ9NV58 838 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 INTS13Q9NVM9 706 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 GID8Q9NWU2 228 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 NMRK1Q9NWW6 199 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 MAFFQ9ULX9 164 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 PLAAQ9Y263 795 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 USP15Q9Y4E8 981 aaPredicted RBP4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 HEY1Q9Y5J3 304 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 SQORQ9Y6N5 450 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 FAM208AQ9UK61 1670 aaKnown RBP4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 NEDD4P46934 1319 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 ACACBO00763 2458 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 COL11A2P13942 1736 aaPredicted RBP4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 DDX60Q8IY21 1712 aaKnown RBP4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 USP24Q9UPU5 2620 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 KIF1BO60333 1816 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 SLX4Q8IY92 1834 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 MYO15AQ9UKN7 3530 aa4.88□□□□□ -1.63
HNRNPC-229ENST00000557157 MYH10P35580 1976 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 FAM237AA0A1B0GTK4 181 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 LOC105371267A0A1B0GV96 52 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 ARHGAP10A1A4S6 786 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 ERVV-2B6SEH9 535 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 GOLGA8MH3BSY2 632 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 FSCN2O14926 492 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 SNX2O60749 519 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 CNOT3O75175 753 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 VAMP4O75379 141 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 DGKIO75912 1065 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 MTA2O94776 668 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 BAIAP3O94812 1187 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 WISP1O95388 367 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 MED26O95402 600 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 GJB6O95452 261 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 WNT11O96014 354 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 KRT6AP02538 564 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 KRT6BP04259 564 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 ATP1A1P05023 1023 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 P4HBP07237 508 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 ZNF12P17014 697 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 RXRAP19793 462 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 HPDP32754 393 aaPredicted RBP4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 PPARGP37231 505 aaPredicted RBP4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 PBX1P40424 430 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 CCNFP41002 786 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 PAFAH1B1P43034 410 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 ZAP70P43403 619 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 PIP4K2AP48426 406 aaPredicted RBP4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 TNNI2P48788 182 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 THOP1P52888 689 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 ARFIP2P53365 341 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 GJA9P57773 515 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 RTP1P59025 263 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 CYP4A11Q02928 519 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 GOLGA8FQ08AF8 430 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 C2orf54Q08AI8 447 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 GOLGA8DPQ0D2H9 430 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 AP1B1Q10567 949 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 CUL1Q13616 776 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 HLTFQ14527 1009 aaKnown RBP eCLIP4.87□□□□□ -1.639e-12■□□□□ 10.7
HNRNPC-229ENST00000557157 MTF1Q14872 753 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 TRIP4Q15650 581 aaPredicted RBP4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 CCDC6Q16204 474 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 ZNF423Q2M1K9 1284 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 ODF2Q5BJF6 829 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 WDR45BQ5MNZ6 344 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 NDUFAF5Q5TEU4 345 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 HAUS3Q68CZ6 603 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 SIGIRRQ6IA17 410 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 KIAA1841Q6NSI8 718 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 CCDC62Q6P9F0 684 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 LRRC8BQ6P9F7 803 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 TUBA3EQ6PEY2 450 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 DHRS4L2Q6PKH6 230 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 SLC4A10Q6U841 1118 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 TMTC3Q6ZXV5 915 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 ZC3H18Q86VM9 953 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 DTX1Q86Y01 620 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 CLEC10AQ8IUN9 316 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 NELFCDQ8IXH7 590 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 FAM20CQ8IXL6 584 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 SPARTQ8N0X7 666 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 FAM133AQ8N9E0 248 aa4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 LILRB1Q8NHL6 650 aaPredicted RBP4.87□□□□□ -1.63
HNRNPC-229ENST00000557157 PYROXD1Q8WU10 500 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms