RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CAVIN1Q6NZI2 390 aaKnown RBP5.51□□□□□ -1.53
ATXN3-246ENST00000557030 ZNF572Q7Z3I7 529 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-246ENST00000557030 C8orf58Q8NAV2 365 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 FAXDC2Q96IV6 333 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 ZNF768Q9H5H4 540 aaKnown RBP5.51□□□□□ -1.53
ATXN3-246ENST00000557030 GREM2Q9H772 168 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 BCO1Q9HAY6 547 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 HDAC5Q9UQL6 1122 aa5.51□□□□□ -1.53
ATXN3-246ENST00000557030 PTPRCP08575 1304 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 TTC21AQ8NDW8 1320 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 ERC2O15083 957 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 RPS6KA4O75676 772 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 ITGB1P05556 798 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 GSPT1P15170 499 aaKnown RBP5.5□□□□□ -1.53
ATXN3-246ENST00000557030 ZSCAN20P17040 1043 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-246ENST00000557030 ECHS1P30084 290 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 APOBEC3AP31941 199 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-246ENST00000557030 FLT3LGP49771 235 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 INHBCP55103 352 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 FAM189BP81408 668 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 EXOSC10Q01780 885 aaKnown RBP5.5□□□□□ -1.53
ATXN3-246ENST00000557030 COL10A1Q03692 680 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 DCTN1Q14203 1278 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 PCBP2Q15366 365 aaKnown RBP eCLIP5.5□□□□□ -1.53
ATXN3-246ENST00000557030 PTPN21Q16825 1174 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 INAVAQ3KP66 663 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 HSP90AB2PQ58FF8 381 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 FAM47AQ5JRC9 791 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 SULT6B1Q6IMI4 303 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 SASS6Q6UVJ0 657 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 LRRC55Q6ZSA7 311 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 FAM184AQ8NB25 1140 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 OR7D4Q8NG98 312 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 SLC46A2Q9BY10 475 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 LDAHQ9H6V9 325 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 NRDE2Q9H7Z3 1164 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 RBM12Q9NTZ6 932 aaKnown RBP5.5□□□□□ -1.53
ATXN3-246ENST00000557030 MARF1Q9Y4F3 1742 aaKnown RBP5.5□□□□□ -1.53
ATXN3-246ENST00000557030 ARHGEF10O15013 1369 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 KIAA0232Q92628 1395 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 PIK3C2AO00443 1686 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 COL4A3Q01955 1670 aa5.5□□□□□ -1.53
ATXN3-246ENST00000557030 RGPD8O14715 1765 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-246ENST00000557030 MAP3K19Q56UN5 1328 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 WDR33Q9C0J8 1336 aaKnown RBP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 CRB1P82279 1406 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 ANKARQ7Z5J8 1434 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 FMN2Q9NZ56 1722 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 UQCRHLA0A096LP55 91 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 TRIM75PA6NK02 468 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 DIRC3C9JPN6 131 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 CHL1O00533 1208 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 PJA2O43164 708 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 SUV39H1O43463 412 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 LETM1O95202 739 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 UQCRHP07919 91 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 ALOX15P16050 662 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 GUCY1A2P33402 732 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 SREBF1P36956 1147 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 MCAMP43121 646 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 HMGN5P82970 282 aaKnown RBP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 GJC2Q5T442 439 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 FAM102AQ5T9C2 384 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 FAM180AQ6UWF9 173 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 PDZD4Q76G19 769 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 PNMA8AQ86V59 439 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 PQLC1Q8N2U9 271 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 SLC35B2Q8TB61 432 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 CPT1CQ8TCG5 803 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 JADE3Q92613 823 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 DPF2Q92785 391 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 MYEOVQ96EZ4 313 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 FUBP3Q96I24 572 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 DCLRE1CQ96SD1 692 aaKnown RBP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 CEP89Q96ST8 783 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 MLST8Q9BVC4 326 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 TSPY26PQ9H489 355 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 SPON1Q9HCB6 807 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 ZNF277Q9NRM2 450 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 FAM30AQ9NZY2 134 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 KLHL42Q9P2K6 505 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 REXO2Q9Y3B8 237 aaKnown RBP5.49□□□□□ -1.53
ATXN3-246ENST00000557030 USP54Q70EL1 1684 aa5.49□□□□□ -1.53
ATXN3-246ENST00000557030 PNPLA7Q6ZV29 1317 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 NWD1Q149M9 1564 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 SBNO1A3KN83 1393 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 SHTN1A0MZ66 631 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 KLHL33A6NCF5 533 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 TMEM200CA6NKL6 621 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 CXorf49A8MYA2 514 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-246ENST00000557030 PRR5-ARHGAP8B1AHC4 643 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 FOXN1O15353 648 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 PCDHGA12O60330 932 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 RECQL4O94761 1208 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 SCAF4O95104 1147 aaKnown RBP5.48□□□□□ -1.53
ATXN3-246ENST00000557030 PTMAP06454 111 aaKnown RBP5.48□□□□□ -1.53
ATXN3-246ENST00000557030 CUL4AQ13619 759 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 KRT24Q2M2I5 525 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 CEP85Q6P2H3 762 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 GDF7Q7Z4P5 450 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms