RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 TRIM6Q9C030 488 aaPredicted RBP13.45□□□□□ -0.26
ABCD4-226ENST00000556971 EPN3Q9H201 632 aa13.45□□□□□ -0.26
ABCD4-226ENST00000556971 FTSJ1Q9UET6 329 aa13.45□□□□□ -0.26
ABCD4-226ENST00000556971 PARP2Q9UGN5 583 aa13.45□□□□□ -0.26
ABCD4-226ENST00000556971 SAMM50Q9Y512 469 aa13.45□□□□□ -0.26
ABCD4-226ENST00000556971 YIPF1Q9Y548 306 aa13.45□□□□□ -0.26
ABCD4-226ENST00000556971 PCDHA10Q9Y5I2 948 aa13.45□□□□□ -0.26
ABCD4-226ENST00000556971 K7EQS6 105 aa13.44□□□□□ -0.26
ABCD4-226ENST00000556971 SGK1O00141 431 aa13.44□□□□□ -0.26
ABCD4-226ENST00000556971 MEIS1O00470 390 aa13.44□□□□□ -0.26
ABCD4-226ENST00000556971 KLF8O95600 359 aaPredicted RBP13.44□□□□□ -0.26
ABCD4-226ENST00000556971 CYP4F8P98187 520 aa13.44□□□□□ -0.26
ABCD4-226ENST00000556971 BNC1Q01954 994 aa13.44□□□□□ -0.26
ABCD4-226ENST00000556971 TARBP2Q15633 366 aaKnown RBP13.44□□□□□ -0.26
ABCD4-226ENST00000556971 SIRT2Q8IXJ6 389 aa13.44□□□□□ -0.26
ABCD4-226ENST00000556971 HACE1Q8IYU2 909 aa13.44□□□□□ -0.26
ABCD4-226ENST00000556971 ZCCHC9Q8N567 271 aaKnown RBP13.44□□□□□ -0.26
ABCD4-226ENST00000556971 CCDC26Q8TAB7 109 aa13.44□□□□□ -0.26
ABCD4-226ENST00000556971 UBAC1Q9BSL1 405 aa13.44□□□□□ -0.26
ABCD4-226ENST00000556971 HIVEP1P15822 2718 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 SVILO95425 2214 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 MED13LQ71F56 2210 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 IGHV1OR15-9A0A0B4J2B8 117 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 IGKV6-21A0A0C4DH24 114 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 ZNF213O14771 459 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 HMMRO75330 724 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 ERLIN2O94905 339 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 GRK6P43250 576 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 USP11P51784 963 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 SUZ12Q15022 739 aaKnown RBP13.43□□□□□ -0.26
ABCD4-226ENST00000556971 ARHGAP15Q53QZ3 475 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 SMAP1Q8IYB5 467 aaPredicted RBP13.43□□□□□ -0.26
ABCD4-226ENST00000556971 CPA6Q8N4T0 437 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 RIN3Q8TB24 985 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 TMEM131Q92545 1883 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 DNAJC25Q9H1X3 360 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 CALCOCO1Q9P1Z2 691 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 ZSWIM5Q9P217 1185 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 CCL26Q9Y258 94 aa13.43□□□□□ -0.26
ABCD4-226ENST00000556971 ZNF638Q14966 1978 aaKnown RBP13.43□□□□□ -0.26
ABCD4-226ENST00000556971 A0A1B0GTW7 788 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 TSPAN1O60635 241 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 RFPL3O75679 317 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 FAM87AP0C7U9 286 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 SRGAP2CP0DJJ0 459 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 SYCP2LQ5T4T6 812 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 NOTUMQ6P988 496 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 SRGAP1Q7Z6B7 1085 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 OXER1Q8TDS5 423 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 ZFRQ96KR1 1074 aaKnown RBP13.42□□□□□ -0.26
ABCD4-226ENST00000556971 ARHGAP9Q9BRR9 750 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 ECT2Q9H8V3 914 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 ZDHHC4Q9NPG8 344 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 PCDHGA1Q9Y5H4 931 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 COL4A3BPQ9Y5P4 624 aa13.42□□□□□ -0.26
ABCD4-226ENST00000556971 MYO18AQ92614 2054 aaKnown RBP13.41□□□□□ -0.26
ABCD4-226ENST00000556971 A1L4Q6 167 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 ZNF316A6NFI3 1004 aaPredicted RBP13.41□□□□□ -0.26
ABCD4-226ENST00000556971 CBX4O00257 560 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 B3GAT3O94766 335 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 GABRR2P28476 465 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 BRCC3P46736 316 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
ABCD4-226ENST00000556971 TPGS2Q68CL5 300 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 IL27RAQ6UWB1 636 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 PLA2G4DQ86XP0 818 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 POTEDQ86YR6 584 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 IL17RCQ8NAC3 791 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 CCDC51Q96ER9 411 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 RRP36Q96EU6 259 aaKnown RBP13.41□□□□□ -0.26
ABCD4-226ENST00000556971 ZNF578Q96N58 590 aaPredicted RBP13.41□□□□□ -0.26
ABCD4-226ENST00000556971 CEP89Q96ST8 783 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 TASP1Q9H6P5 420 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 CYP8B1Q9UNU6 501 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 PDZD2O15018 2839 aa13.41□□□□□ -0.26
ABCD4-226ENST00000556971 PTGESO14684 152 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 RECQL4O94761 1208 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 WEE1P30291 646 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 TIE1P35590 1138 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 DNAJC3Q13217 504 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 SEC23AQ15436 765 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 WDR45BQ5MNZ6 344 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 CC2D1AQ6P1N0 951 aaPredicted RBP13.4□□□□□ -0.26
ABCD4-226ENST00000556971 FBXL19Q6PCT2 694 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 NFXL1Q6ZNB6 911 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 CDR2LQ86X02 465 aaPredicted RBP13.4□□□□□ -0.26
ABCD4-226ENST00000556971 SFTPA1Q8IWL2 248 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 EXTL1Q92935 676 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 DPH1Q9BZG8 443 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 MIR1-1HGQ9H1L0 117 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 CXCL16Q9H2A7 254 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 SEC63Q9UGP8 760 aaKnown RBP13.4□□□□□ -0.26
ABCD4-226ENST00000556971 AFF4Q9UHB7 1163 aaKnown RBP13.4□□□□□ -0.26
ABCD4-226ENST00000556971 FBXL5Q9UKA1 691 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 ANK1P16157 1881 aa13.4□□□□□ -0.26
ABCD4-226ENST00000556971 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
ABCD4-226ENST00000556971 NPTXRO95502 500 aa13.39□□□□□ -0.27
ABCD4-226ENST00000556971 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
ABCD4-226ENST00000556971 COL8A1P27658 744 aa13.39□□□□□ -0.27
ABCD4-226ENST00000556971 DCTP40126 519 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms