RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 MARSP56192 900 aaKnown RBP18.76■□□□□ 0.59
SHMT2-225ENST00000556798 RAB33AQ14088 237 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 ANO6Q4KMQ2 910 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 ZNF667Q5HYK9 610 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 SLC8B1Q6J4K2 584 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 TMEM184AQ6ZMB5 413 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 SEMA4DQ92854 862 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 THAP9Q9H5L6 903 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 SMYD3Q9H7B4 428 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 SAMSN1Q9NSI8 373 aaKnown RBP18.76■□□□□ 0.59
SHMT2-225ENST00000556798 COG5Q9UP83 839 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 NFE2L3Q9Y4A8 694 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 PTPRDP23468 1912 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 SPDYE4A6NLX3 237 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 SLC34A2O95436 690 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 ASS1P00966 412 aaKnown RBP18.75■□□□□ 0.59
SHMT2-225ENST00000556798 ACAT1P24752 427 aaKnown RBP18.75■□□□□ 0.59
SHMT2-225ENST00000556798 RAP1GAPP47736 663 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 FMO5P49326 533 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 CDR1P51861 262 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 NOP14P78316 857 aaKnown RBP18.75■□□□□ 0.59
SHMT2-225ENST00000556798 MYL7Q01449 175 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 SGSM1Q2NKQ1 1148 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 ANKRD54Q6NXT1 300 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 LILRA6Q6PI73 481 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 C12orf76Q8N812 135 aaPredicted RBP18.75■□□□□ 0.59
SHMT2-225ENST00000556798 FBXL13Q8NEE6 735 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 FEZF2Q8TBJ5 459 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 ENOX1Q8TC92 643 aaKnown RBP18.75■□□□□ 0.59
SHMT2-225ENST00000556798 KBTBD7Q8WVZ9 684 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 MRPL45Q9BRJ2 306 aaKnown RBP18.75■□□□□ 0.59
SHMT2-225ENST00000556798 FUCA2Q9BTY2 467 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 VRTNQ9H8Y1 702 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 APOBEC3GQ9HC16 384 aaKnown RBP18.75■□□□□ 0.59
SHMT2-225ENST00000556798 DDX43Q9NXZ2 648 aaKnown RBP18.75■□□□□ 0.59
SHMT2-225ENST00000556798 FBXW11Q9UKB1 542 aa18.75■□□□□ 0.59
SHMT2-225ENST00000556798 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.75■□□□□ 0.59
SHMT2-225ENST00000556798 OR6C75A6NL08 312 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 LETM1O95202 739 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-225ENST00000556798 MTIF2P46199 727 aaKnown RBP18.74■□□□□ 0.59
SHMT2-225ENST00000556798 KCNH2Q12809 1159 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 ZSCAN23Q3MJ62 389 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 SYCE2Q6PIF2 218 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 LIMS2Q7Z4I7 341 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 THEM5Q8N1Q8 247 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 TMEM86AQ8N2M4 240 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 KREMEN2Q8NCW0 462 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 MSLNLQ96KJ4 702 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 PGLYRP2Q96PD5 576 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 IMPG2Q9BZV3 1241 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 RAB20Q9NX57 234 aa18.74■□□□□ 0.59
SHMT2-225ENST00000556798 UNC80Q8N2C7 3258 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 CDH8P55286 799 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 CCDC142Q17RM4 750 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 RARS2Q5T160 578 aaKnown RBP18.73■□□□□ 0.59
SHMT2-225ENST00000556798 RNF19BQ6ZMZ0 732 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 DPH6Q7L8W6 267 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 FAM114A1Q8IWE2 563 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 TAF4BQ92750 862 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 ZCWPW1Q9H0M4 648 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 SDCBP2Q9H190 292 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 DZANK1Q9NVP4 752 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 MAGEC2Q9UBF1 373 aaPredicted RBP18.73■□□□□ 0.59
SHMT2-225ENST00000556798 CD207Q9UJ71 328 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 CDH22Q9UJ99 828 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 NME7Q9Y5B8 376 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 MYH10P35580 1976 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 DENND4AQ7Z401 1863 aa18.73■□□□□ 0.59
SHMT2-225ENST00000556798 C5orf42Q9H799 3197 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 KCNJ18B7U540 433 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 GABRDO14764 452 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 RFPL2O75678 378 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 ABLIM3O94929 683 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 AFPP02771 609 aaKnown RBP18.72■□□□□ 0.59
SHMT2-225ENST00000556798 C8AP07357 584 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 WARSP23381 471 aaKnown RBP18.72■□□□□ 0.59
SHMT2-225ENST00000556798 LMO2P25791 158 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 ASPAP45381 313 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 MYL5Q02045 173 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 KCNJ12Q14500 433 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 SLC39A12Q504Y0 691 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 AOPEPQ8N6M6 819 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 CCDC150Q8NCX0 1101 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 ZNF461Q8TAF7 563 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 SLC7A14Q8TBB6 771 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 OXCT2Q9BYC2 517 aaPredicted RBP18.72■□□□□ 0.59
SHMT2-225ENST00000556798 COQ4Q9Y3A0 265 aa18.72■□□□□ 0.59
SHMT2-225ENST00000556798 N4BP1O75113 896 aaKnown RBP18.71■□□□□ 0.59
SHMT2-225ENST00000556798 TACC1O75410 805 aa18.71■□□□□ 0.59
SHMT2-225ENST00000556798 VNN2O95498 520 aa18.71■□□□□ 0.59
SHMT2-225ENST00000556798 PDGFRBP09619 1106 aa18.71■□□□□ 0.59
SHMT2-225ENST00000556798 WEE2P0C1S8 567 aa18.71■□□□□ 0.59
SHMT2-225ENST00000556798 P4HA1P13674 534 aa18.71■□□□□ 0.59
SHMT2-225ENST00000556798 LHX1P48742 406 aa18.71■□□□□ 0.59
SHMT2-225ENST00000556798 KCNQ1P51787 676 aa18.71■□□□□ 0.59
SHMT2-225ENST00000556798 PSMC1P62191 440 aaKnown RBP18.71■□□□□ 0.59
SHMT2-225ENST00000556798 ADCY1Q08828 1119 aa18.71■□□□□ 0.59
SHMT2-225ENST00000556798 LRMPQ12912 555 aa18.71■□□□□ 0.59
SHMT2-225ENST00000556798 GPR17Q13304 367 aa18.71■□□□□ 0.59
SHMT2-225ENST00000556798 LEXMQ3ZCV2 418 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms