RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 DNAJC24Q6P3W2 148 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 KDM7AQ6ZMT4 941 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 DPP9Q86TI2 863 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 PRUNE1Q86TP1 453 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 RHOT1Q8IXI2 618 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 KIAA0319LQ8IZA0 1049 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 OR6J1Q8NGC5 347 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 UHMK1Q8TAS1 419 aaKnown RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 EMID1Q96A84 441 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 VCPIP1Q96JH7 1222 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 BCO2Q9BYV7 579 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 ELOVL4Q9GZR5 314 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 MRPL47Q9HD33 250 aaKnown RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 PARVAQ9NVD7 372 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 SLC45A1Q9Y2W3 748 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 SCINQ9Y6U3 715 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 IVNS1ABPQ9Y6Y0 642 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 PASKQ96RG2 1323 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 F8VP50 259 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 GOLGA8SH3BPF8 625 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 H3BRB1 525 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 TP73O15350 636 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 ECEL1O95672 775 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 LSM8O95777 96 aaKnown RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 MCF2P10911 925 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 POLR2BP30876 1174 aaKnown RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 HPDP32754 393 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 PMS2P54278 862 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 RAD23BP54727 409 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 DRG2P55039 364 aaKnown RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 GUCY1A3Q02108 690 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 KLF1Q13351 362 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 PPP1R7Q15435 360 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 WDR72Q3MJ13 1102 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 PTPN20Q4JDL3 420 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 PPP1R15BQ5SWA1 713 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 PNMA8AQ86V59 439 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 IFNLR1Q8IU57 520 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 KATNAL2Q8IYT4 538 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 TMEM35BQ8NCS4 154 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 ART4Q93070 314 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 TUT1Q9H6E5 874 aaKnown RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 GBA2Q9HCG7 927 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 BCCIPQ9P287 314 aaKnown RBP eCLIP10.74□□□□□ -0.69
TMEM260-211ENST00000556648 COL1A2P08123 1366 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 HMGB1P1B2RPK0 211 aaPredicted RBP10.73□□□□□ -0.69
TMEM260-211ENST00000556648 PODXLO00592 558 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 MAGEB2O15479 319 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 KRT1P04264 644 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 CALB1P05937 261 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 MYZAPP0CAP1 466 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 KRT10P13645 584 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 CDH5P33151 784 aaPredicted RBP10.73□□□□□ -0.69
TMEM260-211ENST00000556648 VPS41P49754 854 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 ZNF667Q5HYK9 610 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 SPRYD7Q5W111 196 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 ILDR2Q71H61 639 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 ZNF467Q7Z7K2 595 aaPredicted RBP10.73□□□□□ -0.69
TMEM260-211ENST00000556648 SLC4A11Q8NBS3 891 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 JOSD2Q8TAC2 188 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.73□□□□□ -0.69
TMEM260-211ENST00000556648 SCLT1Q96NL6 688 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 RNF19AQ9NV58 838 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 SETD4Q9NVD3 440 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 PCDHGC3Q9UN70 934 aa10.73□□□□□ -0.69
TMEM260-211ENST00000556648 EIF3HO15372 352 aaKnown RBP eCLIP10.72□□□□□ -0.69
TMEM260-211ENST00000556648 ERBB2P04626 1255 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 MAN1A1P33908 653 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 CHKAP35790 457 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 PSMC4P43686 418 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 GCLCP48506 637 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-211ENST00000556648 LACTBP83111 547 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-211ENST00000556648 POU5F1BQ06416 359 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 ACVR2BQ13705 512 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 KIZQ2M2Z5 673 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 KRT71Q3SY84 523 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 DUSP28Q4G0W2 176 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 KAZNQ674X7 775 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 PLEKHH3Q7Z736 793 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 SLCO2A1Q92959 643 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 CCDC114Q96M63 670 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 PWWP2AQ96N64 755 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 OSBPL8Q9BZF1 889 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 FAM49AQ9H0Q0 323 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-211ENST00000556648 SEMA4AQ9H3S1 761 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 CDHR5Q9HBB8 845 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 AAASQ9NRG9 546 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 DNAJC17Q9NVM6 304 aaKnown RBP10.72□□□□□ -0.69
TMEM260-211ENST00000556648 IP6K2Q9UHH9 426 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 CPA4Q9UI42 421 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.72□□□□□ -0.69
TMEM260-211ENST00000556648 GOLGA6L10A6NI86 522 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 STRNO43815 780 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 ZEB2O60315 1214 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 CELF2O95319 508 aaKnown RBP10.72□□□□□ -0.69
TMEM260-211ENST00000556648 CYP3A5P20815 502 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 IVDP26440 423 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 TNFAIP2Q03169 654 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 PTK6Q13882 451 aa10.72□□□□□ -0.69
TMEM260-211ENST00000556648 HIC1Q14526 733 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms