RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 FOXK1P85037 733 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 IL9RQ01113 521 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 BNC1Q01954 994 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 TRAF1Q13077 416 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 DNAJC3Q13217 504 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 TUSC3Q13454 348 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 SART3Q15020 963 aaKnown RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 HLA-BQ31612 363 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 LINC00303Q3SY05 128 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 C8orf34Q49A92 452 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 SPDYCQ5MJ68 293 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 IFIT1BQ5T764 474 aaKnown RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 NFXL1Q6ZNB6 911 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 ZNF410Q86VK4 478 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 PTRH1Q86Y79 214 aaKnown RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 DHX40Q8IX18 779 aaKnown RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 TCEAL8Q8IYN2 117 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 TXNDC5Q8NBS9 432 aaKnown RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 ZNF461Q8TAF7 563 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 EXTL1Q92935 676 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 HIC2Q96JB3 615 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 ZFRQ96KR1 1074 aaKnown RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 FAM167AQ96KS9 214 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 TBC1D32Q96NH3 1257 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 INO80BQ9C086 356 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 GPR88Q9GZN0 384 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 MIR1-1HGQ9H1L0 117 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 ATXN3LQ9H3M9 355 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 RWDD1Q9H446 243 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 RIOX1Q9H6W3 641 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 UPF2Q9HAU5 1272 aaKnown RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 IFT122Q9HBG6 1241 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 UBN1Q9NPG3 1134 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 CD93Q9NPY3 652 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 THG1LQ9NWX6 298 aaKnown RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 FTSJ1Q9UET6 329 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 TCEAL9Q9UHQ7 104 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 CYP8B1Q9UNU6 501 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 CCL26Q9Y258 94 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 SAMM50Q9Y512 469 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 YIPF1Q9Y548 306 aa4.71□□□□□ -1.66
ATXN3-242ENST00000556644 SPENQ96T58 3664 aaKnown RBP4.71□□□□□ -1.66
ATXN3-242ENST00000556644 CEP192Q8TEP8 1941 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 IGHV1OR15-9A0A0B4J2B8 117 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 hCG_1642624A0A1W2PR95 340 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 K7EQS6 105 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 KCNK3O14649 394 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 DHX15O43143 795 aaKnown RBP4.7□□□□□ -1.66
ATXN3-242ENST00000556644 RAB11FIP3O75154 756 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 SOAT2O75908 522 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 ABLIM3O94929 683 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 NPTXRO95502 500 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 CER1O95813 267 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 MPOP05164 745 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 PSAPP07602 524 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 RNF224P0DH78 156 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 SRGAP2CP0DJJ0 459 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 ATF2P15336 505 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 GNSP15586 552 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 DCTP40126 519 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 CDR1P51861 262 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 SCRN1Q12765 414 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 ELAVL2Q12926 359 aaKnown RBP4.7□□□□□ -1.66
ATXN3-242ENST00000556644 GSE1Q14687 1217 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 ALX1Q15699 326 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 CEP55Q53EZ4 464 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 EMC10Q5UCC4 262 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 ZKSCAN2Q63HK3 967 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 KDM7AQ6ZMT4 941 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 GAREM2Q75VX8 874 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 RTL10Q7L3V2 364 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 SIRT2Q8IXJ6 389 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 FTSJ3Q8IY81 847 aaKnown RBP4.7□□□□□ -1.66
ATXN3-242ENST00000556644 LEMD2Q8NC56 503 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 ACAP3Q96P50 834 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 ARHGAP9Q9BRR9 750 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 LRRC3Q9BY71 257 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 TRIM6Q9C030 488 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-242ENST00000556644 DNAJC25Q9H1X3 360 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 PSTPIP2Q9H939 334 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 SENP2Q9HC62 589 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 GPRC5CQ9NQ84 441 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 CALCOCO1Q9P1Z2 691 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 SUSD2Q9UGT4 822 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 TBX20Q9UMR3 447 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 PLAAQ9Y263 795 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 GIT1Q9Y2X7 761 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 PCDHB1Q9Y5F3 818 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 BACE2Q9Y5Z0 518 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 MYLKQ15746 1914 aa4.7□□□□□ -1.66
ATXN3-242ENST00000556644 KNL1Q8NG31 2342 aa4.69□□□□□ -1.66
ATXN3-242ENST00000556644 MYH9P35579 1960 aaKnown RBP4.69□□□□□ -1.66
ATXN3-242ENST00000556644 NUP210Q8TEM1 1887 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-242ENST00000556644 A0A1B0GVT2 93 aa4.69□□□□□ -1.66
ATXN3-242ENST00000556644 MEI4A8MW99 385 aa4.69□□□□□ -1.66
ATXN3-242ENST00000556644 K7ENP7 123 aa4.69□□□□□ -1.66
ATXN3-242ENST00000556644 PTGESO14684 152 aa4.69□□□□□ -1.66
ATXN3-242ENST00000556644 CHMP2AO43633 222 aa4.69□□□□□ -1.66
ATXN3-242ENST00000556644 TSPAN1O60635 241 aa4.69□□□□□ -1.66
ATXN3-242ENST00000556644 RFPL3O75679 317 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms