RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 TASP1Q9H6P5 420 aa12.92□□□□□ -0.34
ACTN1-221ENST00000556571 CITO14578 2027 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 FAM208BQ5VWN6 2430 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 EXTL3O43909 919 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 EPN2O95208 641 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 MAPTP10636 758 aaKnown RBP12.91□□□□□ -0.34
ACTN1-221ENST00000556571 PAX3P23760 479 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 MATR3P43243 847 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■■■■□ 26.1
ACTN1-221ENST00000556571 RAP1GAPP47736 663 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 TUFMP49411 452 aaKnown RBP12.91□□□□□ -0.34
ACTN1-221ENST00000556571 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-221ENST00000556571 PPP2R3AQ06190 1150 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 TNK2Q07912 1038 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 ST3GAL1Q11201 340 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 LLPHQ9BRT6 129 aaKnown RBP12.91□□□□□ -0.34
ACTN1-221ENST00000556571 ZMYM5Q9UJ78 669 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 SLC8A2Q9UPR5 921 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 PCDHGA5Q9Y5G8 931 aa12.91□□□□□ -0.34
ACTN1-221ENST00000556571 H0YCG3 227 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 LAD1O00515 517 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 AKAP3O75969 853 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 PRAMEF12O95522 483 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 CCDC192P0DO97 292 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 ODC1P11926 461 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 CDC25CP30307 473 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 HOXC13P31276 330 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 MCM2P49736 904 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 GRSF1Q12849 480 aaKnown RBP eCLIP12.9□□□□□ -0.34
ACTN1-221ENST00000556571 NBR1Q14596 966 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 VEPH1Q14D04 833 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 STPG1Q5TH74 334 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 KBTBD6Q86V97 674 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 TMEM130Q8N3G9 435 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 KCTD17Q8N5Z5 321 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 SENP8Q96LD8 212 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 GCNAQ96QF7 691 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 ATRXP46100 2492 aa12.9□□□□□ -0.34
ACTN1-221ENST00000556571 PP2D1A8MPX8 630 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 LACTBL1A8MY62 500 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 SOAT2O75908 522 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 CDC25AP30304 524 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 PRPHP41219 470 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 PXNP49023 591 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-221ENST00000556571 LILRA4P59901 499 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 CYP4F8P98187 520 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 AMPD2Q01433 879 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 RAD51AP2Q09MP3 1159 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 CCDC6Q16204 474 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 TAF12Q16514 161 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 TMEM196Q5HYL7 178 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 PLA2G2CQ5R387 149 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 SPATA1Q5VX52 437 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 DTHD1Q6ZMT9 781 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 CCDC83Q8IWF9 413 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 CD302Q8IX05 232 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 CAMKK1Q8N5S9 505 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 TTC9BQ8N6N2 239 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 BICD1Q96G01 975 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 ZC3H10Q96K80 434 aaKnown RBP12.89□□□□□ -0.35
ACTN1-221ENST00000556571 SEPT5Q99719 369 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-221ENST00000556571 FAM83CQ9BQN1 747 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 MMTAG2Q9BU76 263 aaKnown RBP12.89□□□□□ -0.35
ACTN1-221ENST00000556571 LSM14BQ9BX40 385 aaKnown RBP12.89□□□□□ -0.35
ACTN1-221ENST00000556571 SLC46A2Q9BY10 475 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 HAPLN2Q9GZV7 340 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 VPS45Q9NRW7 570 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 GKN1Q9NS71 199 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 RXFP3Q9NSD7 469 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 KCND2Q9NZV8 630 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 LIMCH1Q9UPQ0 1083 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 SPAG17Q6Q759 2223 aa12.89□□□□□ -0.35
ACTN1-221ENST00000556571 TRDMT1O14717 391 aaKnown RBP12.88□□□□□ -0.35
ACTN1-221ENST00000556571 KCNK5O95279 499 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 ADRB2P07550 413 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 U2AF2P26368 475 aaKnown RBP eCLIP12.88□□□□□ -0.35
ACTN1-221ENST00000556571 TNFSF9P41273 254 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 TOB1P50616 345 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-221ENST00000556571 GUCY2FP51841 1108 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
ACTN1-221ENST00000556571 SMARCB1Q12824 385 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 RUNX3Q13761 415 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 ZRSR1Q15695 479 aaKnown RBP12.88□□□□□ -0.35
ACTN1-221ENST00000556571 ENOX2Q16206 610 aaKnown RBP12.88□□□□□ -0.35
ACTN1-221ENST00000556571 IL17AQ16552 155 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 MGAT5BQ3V5L5 792 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 SLC39A12Q504Y0 691 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 FSTL4Q6MZW2 842 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 PKN3Q6P5Z2 889 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 CMTM8Q8IZV2 173 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 SYT2Q8N9I0 419 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-221ENST00000556571 FAM184AQ8NB25 1140 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 KCNN1Q92952 543 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 LPIN3Q9BQK8 851 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 SMG9Q9H0W8 520 aaKnown RBP12.88□□□□□ -0.35
ACTN1-221ENST00000556571 RPF1Q9H9Y2 349 aaKnown RBP12.88□□□□□ -0.35
ACTN1-221ENST00000556571 IL21Q9HBE4 155 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 LARSQ9P2J5 1176 aaKnown RBP12.88□□□□□ -0.35
ACTN1-221ENST00000556571 DSEQ9UL01 958 aa12.88□□□□□ -0.35
ACTN1-221ENST00000556571 PCDHB6Q9Y5E3 794 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms