RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 XKR4Q5GH76 650 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 CCDC181Q5TID7 509 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 C9orf57Q5W0N0 161 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 SLC4A11Q8NBS3 891 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 HES6Q96HZ4 224 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 FAXDC2Q96IV6 333 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 ZFP42Q96MM3 310 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 PNKPQ96T60 521 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 UBQLN1Q9UMX0 589 aaKnown RBP19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 MTA2O94776 668 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 RHOXF2BP0C7M4 288 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 SOX4Q06945 474 aaPredicted RBP19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 MMS22LQ6ZRQ5 1243 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 CPNE8Q86YQ8 564 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 C1orf131Q8NDD1 294 aaKnown RBP19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 RUBCNQ92622 972 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 RHOXF2Q9BQY4 288 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 TRIM7Q9C029 511 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 TRPV6Q9H1D0 765 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 CYP3A43Q9HB55 503 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 RNF216Q9NWF9 866 aaPredicted RBP19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 SAGE1Q9NXZ1 904 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 ADAM22Q9P0K1 906 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 PADI3Q9ULW8 664 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 SNX9Q9Y5X1 595 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 MOXD2PA6NHM9 499 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 TLR3O15455 904 aaKnown RBP19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 MYCP01106 439 aaPredicted RBP19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 KCNE1P15382 129 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 ITIH3Q06033 890 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 PTK7Q13308 1070 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 ARHGEF6Q15052 776 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 TRIM71Q2Q1W2 868 aaKnown RBP19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 FBXO47Q5MNV8 452 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 SMYD5Q6GMV2 418 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 FAM105AQ9NUU6 356 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 UVRAGQ9P2Y5 699 aa19.84■□□□□ 0.77
SDR39U1-218ENST00000556262 A0A1W2PQ45 241 aaPredicted RBP19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 A0A1W2PQY0 241 aa19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 PTP4A2Q12974 167 aa19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 MAP9Q49MG5 647 aa19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 C11orf63Q6NUN7 778 aa19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 ZNF572Q7Z3I7 529 aaPredicted RBP19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 PHF13Q86YI8 300 aaPredicted RBP19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 WDTC1Q8N5D0 677 aa19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 LPPQ93052 612 aa19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 TMEM176AQ96HP8 235 aa19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 ACBD3Q9H3P7 528 aa19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 L1RE1Q9UN81 338 aa19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 FRMPD3Q5JV73 1810 aa19.83■□□□□ 0.77
SDR39U1-218ENST00000556262 PTGESO14684 152 aa19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 GPR182O15218 404 aa19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 RPLP2P05387 115 aaKnown RBP19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 PAFAH1B1P43034 410 aa19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 AFF1P51825 1210 aaKnown RBP19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 NDST1P52848 882 aa19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 LPIN1Q14693 890 aa19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 CFAP221Q4G0U5 840 aa19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 ZNF618Q5T7W0 954 aa19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 DENND1BQ6P3S1 775 aa19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 SPATA4Q8NEY3 305 aa19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 CHST12Q9NRB3 414 aa19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 BARX2Q9UMQ3 279 aaPredicted RBP19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 PCDHGC3Q9UN70 934 aa19.83■□□□□ 0.76
SDR39U1-218ENST00000556262 DDX3YO15523 660 aaKnown RBP19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 MGEA5O60502 916 aa19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 PAEPP09466 180 aa19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 MYBL1P10243 752 aa19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 IBSPP21815 317 aaPredicted RBP19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 COMTP21964 271 aa19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 OAS2P29728 719 aaKnown RBP19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 PTPN11Q06124 597 aaPredicted RBP19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 INCA1Q0VD86 236 aa19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 PAK2Q13177 524 aa19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 LRRC52Q8N7C0 313 aa19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 TRIM11Q96F44 468 aa19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 MRPL45Q9BRJ2 306 aaKnown RBP19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 TSEN34Q9BSV6 310 aaKnown RBP19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 ERVK-5Q9HDB9 667 aa19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 AVENQ9NQS1 362 aaPredicted RBP19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 ANAPC7Q9UJX3 599 aa19.82■□□□□ 0.76
SDR39U1-218ENST00000556262 PIRO00625 290 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 SPTLC1O15269 473 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 CEP104O60308 925 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 GJB6O95452 261 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 LSM8O95777 96 aaKnown RBP19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 MMP8P22894 467 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 PRMT2P55345 433 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 VSNL1P62760 191 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 DPH6Q7L8W6 267 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 CALR3Q96L12 384 aaKnown RBP19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 HEXIM2Q96MH2 286 aaKnown RBP19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 STARD7Q9NQZ5 370 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 ST7Q9NRC1 585 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 CD4P01730 458 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 MLH1P40692 756 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 C1QBPQ07021 282 aaKnown RBP19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 DCAF12L1Q5VU92 463 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 CCDC70Q6NSX1 233 aa19.81■□□□□ 0.76
SDR39U1-218ENST00000556262 TMEM35BQ8NCS4 154 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms