RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CTNNA2P26232 953 aa15.65■□□□□ 0.1
VPS33B-205ENST00000556096 RAD23BP54727 409 aa15.65■□□□□ 0.1
VPS33B-205ENST00000556096 MYO1EQ12965 1108 aa15.65■□□□□ 0.1
VPS33B-205ENST00000556096 ZNF394Q53GI3 561 aa15.65■□□□□ 0.1
VPS33B-205ENST00000556096 PLEKHA7Q6IQ23 1121 aa15.65■□□□□ 0.1
VPS33B-205ENST00000556096 GDF6Q6KF10 455 aaPredicted RBP15.65■□□□□ 0.1
VPS33B-205ENST00000556096 PASD1Q8IV76 773 aa15.65■□□□□ 0.1
VPS33B-205ENST00000556096 BEST2Q8NFU1 509 aa15.65■□□□□ 0.1
VPS33B-205ENST00000556096 DIS3LQ8TF46 1054 aaKnown RBP15.65■□□□□ 0.1
VPS33B-205ENST00000556096 TFAP2BQ92481 460 aa15.65■□□□□ 0.1
VPS33B-205ENST00000556096 ZMAT2Q96NC0 199 aaKnown RBP15.65■□□□□ 0.1
VPS33B-205ENST00000556096 LHX5Q9H2C1 402 aa15.65■□□□□ 0.1
VPS33B-205ENST00000556096 TRPV2Q9Y5S1 764 aa15.65■□□□□ 0.1
VPS33B-205ENST00000556096 SCINQ9Y6U3 715 aa15.65■□□□□ 0.1
VPS33B-205ENST00000556096 CCDC66A2RUB6 948 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 TMEM110-MUSTN1A8MSY1 372 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 CCDC188H7C350 402 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 RECQL4O94761 1208 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 GJA8P48165 433 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 PEX5P50542 639 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 GUCY2FP51841 1108 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 CDH8P55286 799 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 TNNC1P63316 161 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 INCA1Q0VD86 236 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 RNF180Q86T96 592 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 SERINC5Q86VE9 423 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 LRRC52Q8N7C0 313 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 PCSK9Q8NBP7 692 aaKnown RBP15.64■□□□□ 0.09
VPS33B-205ENST00000556096 WHAMMQ8TF30 809 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 NAP1L3Q99457 506 aaPredicted RBP15.64■□□□□ 0.09
VPS33B-205ENST00000556096 C11orf70Q9BRQ4 267 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 NXF3Q9H4D5 531 aaKnown RBP15.64■□□□□ 0.09
VPS33B-205ENST00000556096 SMYD3Q9H7B4 428 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 ANAPC7Q9UJX3 599 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 NOC2LQ9Y3T9 749 aaKnown RBP15.64■□□□□ 0.09
VPS33B-205ENST00000556096 CEP83Q9Y592 693 aa15.64■□□□□ 0.09
VPS33B-205ENST00000556096 CALB1P05937 261 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 KCNE1P15382 129 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 CTNNA1P35221 906 aaKnown RBP15.63■□□□□ 0.09
VPS33B-205ENST00000556096 SLC1A1P43005 524 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 RAP1GAPP47736 663 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 RNASE9P60153 205 aaKnown RBP15.63■□□□□ 0.09
VPS33B-205ENST00000556096 BEND6Q5SZJ8 279 aaPredicted RBP15.63■□□□□ 0.09
VPS33B-205ENST00000556096 DCAF12L1Q5VU92 463 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 C8orf74Q6P047 294 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 MMS22LQ6ZRQ5 1243 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 FAM228AQ86W67 206 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 TMEM130Q8N3G9 435 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 SLC4A11Q8NBS3 891 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 ALG3Q92685 438 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 TMEM176AQ96HP8 235 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 CRISPLD2Q9H0B8 497 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
VPS33B-205ENST00000556096 OGDHLQ9ULD0 1010 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 KIAA1257Q9ULG3 409 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 BARX2Q9UMQ3 279 aaPredicted RBP15.63■□□□□ 0.09
VPS33B-205ENST00000556096 UBQLN1Q9UMX0 589 aaKnown RBP15.63■□□□□ 0.09
VPS33B-205ENST00000556096 HES2Q9Y543 173 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 PCDHA3Q9Y5H8 950 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 CDY2AQ9Y6F7 541 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 MYO1FO00160 1098 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 XPOTO43592 962 aaKnown RBP15.63■□□□□ 0.09
VPS33B-205ENST00000556096 SPOPO43791 374 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 SSTR3P32745 418 aaPredicted RBP15.63■□□□□ 0.09
VPS33B-205ENST00000556096 PTPN11Q06124 597 aaPredicted RBP15.63■□□□□ 0.09
VPS33B-205ENST00000556096 MAMLD1Q13495 774 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 LONRF2Q1L5Z9 754 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 WDTC1Q8N5D0 677 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 BTBD6Q96KE9 485 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 RNPC3Q96LT9 517 aaKnown RBP15.63■□□□□ 0.09
VPS33B-205ENST00000556096 ELOVL4Q9GZR5 314 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 CXCL16Q9H2A7 254 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 PARVAQ9NVD7 372 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 LCMT1Q9UIC8 334 aa15.63■□□□□ 0.09
VPS33B-205ENST00000556096 TLR3O15455 904 aaKnown RBP15.62■□□□□ 0.09
VPS33B-205ENST00000556096 SEC31AO94979 1220 aaKnown RBP15.62■□□□□ 0.09
VPS33B-205ENST00000556096 CD4P01730 458 aa15.62■□□□□ 0.09
VPS33B-205ENST00000556096 VDRP11473 427 aa15.62■□□□□ 0.09
VPS33B-205ENST00000556096 CD19P15391 556 aa15.62■□□□□ 0.09
VPS33B-205ENST00000556096 MNX1P50219 401 aaPredicted RBP15.62■□□□□ 0.09
VPS33B-205ENST00000556096 MAP9Q49MG5 647 aa15.62■□□□□ 0.09
VPS33B-205ENST00000556096 FAM47CQ5HY64 1035 aa15.62■□□□□ 0.09
VPS33B-205ENST00000556096 CCNI2Q6ZMN8 369 aaPredicted RBP15.62■□□□□ 0.09
VPS33B-205ENST00000556096 C1orf131Q8NDD1 294 aaKnown RBP15.62■□□□□ 0.09
VPS33B-205ENST00000556096 KRT35Q92764 455 aa15.62■□□□□ 0.09
VPS33B-205ENST00000556096 SENP6Q9GZR1 1112 aaPredicted RBP15.62■□□□□ 0.09
VPS33B-205ENST00000556096 CHST12Q9NRB3 414 aa15.62■□□□□ 0.09
VPS33B-205ENST00000556096 FAM53CQ9NYF3 392 aa15.62■□□□□ 0.09
VPS33B-205ENST00000556096 STIM2Q9P246 746 aa15.62■□□□□ 0.09
VPS33B-205ENST00000556096 DMGDHQ9UI17 866 aaKnown RBP15.62■□□□□ 0.09
VPS33B-205ENST00000556096 IPPQ9Y573 584 aa15.62■□□□□ 0.09
VPS33B-205ENST00000556096 GRIN2DO15399 1336 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 SMIM28A0A1B0GU29 152 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 KRIT1O00522 736 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 CABYRO75952 493 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 PROSCO94903 275 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 ATF7P17544 494 aaPredicted RBP15.61■□□□□ 0.09
VPS33B-205ENST00000556096 CYP3A5P20815 502 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 AKAP5P24588 427 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 ACLYP53396 1101 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms