RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 DEPDC1Q5TB30 811 aa18.3■□□□□ 0.52
SYNE3-204ENST00000555759 RNF135Q8IUD6 432 aa18.3■□□□□ 0.52
SYNE3-204ENST00000555759 SCFD1Q8WVM8 642 aa18.3■□□□□ 0.52
SYNE3-204ENST00000555759 FAR2Q96K12 515 aa18.3■□□□□ 0.52
SYNE3-204ENST00000555759 DMAP1Q9NPF5 467 aaPredicted RBP18.3■□□□□ 0.52
SYNE3-204ENST00000555759 STMN3Q9NZ72 180 aa18.3■□□□□ 0.52
SYNE3-204ENST00000555759 CROCC2H7BZ55 1655 aa18.3■□□□□ 0.52
SYNE3-204ENST00000555759 GSTT1P30711 240 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 CIITAP33076 1130 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 EFL1Q7Z2Z2 1120 aaKnown RBP18.29■□□□□ 0.52
SYNE3-204ENST00000555759 SH3GL1Q99961 368 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 A1CFQ9NQ94 594 aaKnown RBP18.29■□□□□ 0.52
SYNE3-204ENST00000555759 ATXN3P54252 364 aaPredicted RBP18.29■□□□□ 0.52
SYNE3-204ENST00000555759 RAB14P61106 215 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 NFX1Q12986 1120 aaKnown RBP18.29■□□□□ 0.52
SYNE3-204ENST00000555759 GSTA3Q16772 222 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 DUOXA2Q1HG44 320 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 SUSD4Q5VX71 490 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 MARCH10Q8NA82 808 aaPredicted RBP18.29■□□□□ 0.52
SYNE3-204ENST00000555759 CREG2Q8IUH2 290 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 CNTNAP5Q8WYK1 1306 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 GRK2P25098 689 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 EIF2B2P49770 351 aaKnown RBP18.29■□□□□ 0.52
SYNE3-204ENST00000555759 C16orf72Q14CZ0 275 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 STILQ15468 1287 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 DAGLBQ8NCG7 672 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 CSADQ9Y600 493 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 ATP9BO43861 1147 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 ERVK-9P63128 1117 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 RBBP7Q16576 425 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 EP400NLQ6ZTU2 488 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 P3H2Q8IVL5 708 aa18.29■□□□□ 0.52
SYNE3-204ENST00000555759 FAM193BQ96PV7 902 aaPredicted RBP18.29■□□□□ 0.52
SYNE3-204ENST00000555759 FAM153BP0C7A2 387 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 RBP3P10745 1247 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 PRDX5P30044 214 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 SARSP49591 514 aaKnown RBP18.28■□□□□ 0.52
SYNE3-204ENST00000555759 ITGB3BPQ13352 177 aaPredicted RBP18.28■□□□□ 0.52
SYNE3-204ENST00000555759 KRT72Q14CN4 511 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 FAM153CQ494X1 144 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 SBK1Q52WX2 424 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 TSEN2Q8NCE0 465 aaKnown RBP18.28■□□□□ 0.52
SYNE3-204ENST00000555759 SEMA4AQ9H3S1 761 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 NAALADL1Q9UQQ1 740 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 MYO1DO94832 1006 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 AQP5P55064 265 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 ACAD10Q6JQN1 1059 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 ZFP1Q6P2D0 407 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 CCDC80Q76M96 950 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 LUZP2Q86TE4 346 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 SPATA18Q8TC71 538 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 GDPD5Q8WTR4 605 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 OLA1Q9NTK5 396 aaKnown RBP18.28■□□□□ 0.52
SYNE3-204ENST00000555759 APPL1Q9UKG1 709 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 MADDQ8WXG6 1647 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 MYBP10242 640 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 FCGR1AP12314 374 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 YY1P25490 414 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 CNTFP26441 200 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 EPHB2P29323 1055 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 RPS6P62753 249 aaKnown RBP18.28■□□□□ 0.52
SYNE3-204ENST00000555759 TRIM28Q13263 835 aaKnown RBP18.28■□□□□ 0.52
SYNE3-204ENST00000555759 KCTD2Q14681 263 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 TMC5Q6UXY8 1006 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 FEZF2Q8TBJ5 459 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 HDAC7Q8WUI4 952 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 MCEEQ96PE7 176 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 DIABLOQ9NR28 239 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 SOX13Q9UN79 622 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 FNDC3AQ9Y2H6 1198 aaKnown RBP18.28■□□□□ 0.52
SYNE3-204ENST00000555759 OCM2P0CE71 109 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 OCMP0CE72 109 aaPredicted RBP18.28■□□□□ 0.52
SYNE3-204ENST00000555759 PON1P27169 355 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 IFNEQ86WN2 208 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 CCNJLQ8IV13 435 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 CNPY3Q9BT09 278 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 KBTBD4Q9NVX7 518 aa18.28■□□□□ 0.52
SYNE3-204ENST00000555759 SLCO1B7G3V0H7 640 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 PPEF1O14829 653 aaPredicted RBP18.27■□□□□ 0.52
SYNE3-204ENST00000555759 DGKIO75912 1065 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 ZNF568Q3ZCX4 644 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 TLR10Q9BXR5 811 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 MRPL4Q9BYD3 311 aaKnown RBP18.27■□□□□ 0.52
SYNE3-204ENST00000555759 TMEM8AQ9HCN3 771 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 PREX2Q70Z35 1606 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 SMIM31A0A1B0GVY4 71 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 CST8O60676 142 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 GZMAP12544 262 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 KCNK10P57789 538 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 C11orf63Q6NUN7 778 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 ATP8B4Q8TF62 1192 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 MAGED4Q96JG8 741 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 PLA2G12BQ9BX93 195 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 PAIP1Q9H074 479 aaKnown RBP18.27■□□□□ 0.52
SYNE3-204ENST00000555759 MYLK2Q9H1R3 596 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 COPG2Q9UBF2 871 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 SNX13Q9Y5W8 968 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 ROBO2Q9HCK4 1378 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 MROH7Q68CQ1 1323 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 BCL10O95999 233 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms