RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 FZD9O00144 591 aa5□□□□□ -1.61
SCFD1-216ENST00000555550 AGFG2O95081 481 aa5□□□□□ -1.61
SCFD1-216ENST00000555550 SNUPNO95149 360 aaKnown RBP5□□□□□ -1.61
SCFD1-216ENST00000555550 SBK3P0C264 359 aa5□□□□□ -1.61
SCFD1-216ENST00000555550 FHL1Q13642 323 aa5□□□□□ -1.61
SCFD1-216ENST00000555550 FAM153CQ494X1 144 aa5□□□□□ -1.61
SCFD1-216ENST00000555550 UTP14CQ5TAP6 766 aaKnown RBP5□□□□□ -1.61
SCFD1-216ENST00000555550 CLNKQ7Z7G1 428 aa5□□□□□ -1.61
SCFD1-216ENST00000555550 NSUN7Q8NE18 718 aaKnown RBP5□□□□□ -1.61
SCFD1-216ENST00000555550 RPL36ALQ969Q0 106 aaKnown RBP5□□□□□ -1.61
SCFD1-216ENST00000555550 PGBD1Q96JS3 809 aa5□□□□□ -1.61
SCFD1-216ENST00000555550 SLC13A1Q9BZW2 595 aa5□□□□□ -1.61
SCFD1-216ENST00000555550 BHMT2Q9H2M3 363 aa5□□□□□ -1.61
SCFD1-216ENST00000555550 PADI4Q9UM07 663 aa5□□□□□ -1.61
SCFD1-216ENST00000555550 KCNA2P16389 499 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 EDNRBP24530 442 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 MPGP29372 298 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 SLC6A4P31645 630 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 ADKP55263 362 aaKnown RBP4.99□□□□□ -1.61
SCFD1-216ENST00000555550 RPS7P62081 194 aaKnown RBP4.99□□□□□ -1.61
SCFD1-216ENST00000555550 ODF1Q14990 250 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 PTPROQ16827 1216 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 TTC7BQ86TV6 843 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 VRK1Q99986 396 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-216ENST00000555550 ASPSCR1Q9BZE9 553 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 IMPG2Q9BZV3 1241 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 SERPINB13Q9UIV8 391 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 BTBD3Q9Y2F9 522 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 SPEF1Q9Y4P9 236 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 PCDHB1Q9Y5F3 818 aa4.99□□□□□ -1.61
SCFD1-216ENST00000555550 CFAP20Q9Y6A4 193 aaKnown RBP4.99□□□□□ -1.61
SCFD1-216ENST00000555550 LINC01548A6NM66 108 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 DTNBO60941 627 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 PPP3CBP16298 524 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 SMARCA1P28370 1054 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 RECQLP46063 649 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-216ENST00000555550 TUBA4AP68366 448 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 TLE1Q04724 770 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 ZNF844Q08AG5 666 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 SLC10A2Q12908 348 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-216ENST00000555550 DYRK1AQ13627 763 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 PREPLQ4J6C6 727 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-216ENST00000555550 KHDC1Q4VXA5 237 aaKnown RBP4.98□□□□□ -1.61
SCFD1-216ENST00000555550 CAMKK1Q8N5S9 505 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 SLC17A8Q8NDX2 589 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 IL17RDQ8NFM7 739 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 FBXO41Q8TF61 875 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 MRGPRX4Q96LA9 322 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 SH2D3AQ9BRG2 576 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 JKAMPQ9P055 326 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 CALCOCO1Q9P1Z2 691 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 CTTNBP2NLQ9P2B4 639 aa4.98□□□□□ -1.61
SCFD1-216ENST00000555550 FNDC1Q4ZHG4 1894 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-216ENST00000555550 ANKRD62A6NC57 917 aa4.97□□□□□ -1.61
SCFD1-216ENST00000555550 TOR1BO14657 336 aa4.97□□□□□ -1.61
SCFD1-216ENST00000555550 GNAI3P08754 354 aa4.97□□□□□ -1.61
SCFD1-216ENST00000555550 GNAI1P63096 354 aa4.97□□□□□ -1.61
SCFD1-216ENST00000555550 KLHL22Q53GT1 634 aa4.97□□□□□ -1.61
SCFD1-216ENST00000555550 ZNF365Q70YC5 407 aa4.97□□□□□ -1.61
SCFD1-216ENST00000555550 ZBTB46Q86UZ6 589 aa4.97□□□□□ -1.61
SCFD1-216ENST00000555550 LRIG1Q96JA1 1093 aa4.97□□□□□ -1.61
SCFD1-216ENST00000555550 QTRT1Q9BXR0 403 aaKnown RBP4.97□□□□□ -1.61
SCFD1-216ENST00000555550 SLAMF7Q9NQ25 335 aa4.97□□□□□ -1.61
SCFD1-216ENST00000555550 SLC43A1O75387 559 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 MOSPD3O75425 235 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 SUN1O94901 812 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 NTN1O95631 604 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 IL33O95760 270 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 MALP21145 153 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 MC2RQ01718 297 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 PIGFQ07326 219 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 BRDTQ58F21 947 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-216ENST00000555550 SUMO4Q6EEV6 95 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 YTHDF3Q7Z739 585 aaKnown RBP4.96□□□□□ -1.62
SCFD1-216ENST00000555550 ADGRG5Q8IZF4 528 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 C3orf20Q8ND61 904 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 NSUN6Q8TEA1 469 aaKnown RBP4.96□□□□□ -1.62
SCFD1-216ENST00000555550 RGMAQ96B86 450 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 KLHL32Q96NJ5 620 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 WACQ9BTA9 647 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 NRIP3Q9NQ35 241 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 GNL3LQ9NVN8 582 aaKnown RBP4.96□□□□□ -1.62
SCFD1-216ENST00000555550 SERGEFQ9UGK8 458 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 SLC45A2Q9UMX9 530 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 POLHQ9Y253 713 aa4.96□□□□□ -1.62
SCFD1-216ENST00000555550 LUC7L2Q9Y383 392 aaKnown RBP4.96□□□□□ -1.62
SCFD1-216ENST00000555550 CCDC195A0A1B0GUA6 201 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 WDR27A2RRH5 827 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 LATS1O95835 1130 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 HNRNPCP07910 306 aaKnown RBP eCLIP4.95□□□□□ -1.62
SCFD1-216ENST00000555550 NR2F6P10588 404 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 EPHB2P29323 1055 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 PSMC1P62191 440 aaKnown RBP4.95□□□□□ -1.62
SCFD1-216ENST00000555550 SNAPC2Q13487 334 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 FLYWCH1Q4VC44 716 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 CCDC93Q567U6 631 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 THEMIS2Q5TEJ8 643 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 SLC9A4Q6AI14 798 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 SLC4A10Q6U841 1118 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 CRELD2Q6UXH1 353 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms