RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 RAB33AQ14088 237 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 LEXMQ3ZCV2 418 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 RTP2Q5QGT7 225 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 VARS2Q5ST30 1063 aaKnown RBP11.39□□□□□ -0.59
TMEM260-206ENST00000555046 TPGS2Q68CL5 300 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 OVOS1Q6IE37 1185 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 CES5AQ6NT32 575 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 CCDC149Q6ZUS6 474 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 ADGRD2Q7Z7M1 963 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 ZC3H3Q8IXZ2 948 aaKnown RBP11.39□□□□□ -0.59
TMEM260-206ENST00000555046 TOP6BLQ8N6T0 577 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 OR5B17Q8NGF7 314 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 ZNF461Q8TAF7 563 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 AUTS2Q8WXX7 1259 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 FAXDC2Q96IV6 333 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 UBE2ZQ9H832 354 aaPredicted RBP11.39□□□□□ -0.59
TMEM260-206ENST00000555046 ANO10Q9NW15 660 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 MTRRQ9UBK8 725 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 ZFYVE26Q68DK2 2539 aa11.39□□□□□ -0.59
TMEM260-206ENST00000555046 FNDC1Q4ZHG4 1894 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-206ENST00000555046 FLNBO75369 2602 aaKnown RBP11.38□□□□□ -0.59
TMEM260-206ENST00000555046 LRRIQ3A6PVS8 624 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-206ENST00000555046 C4BPAP04003 597 aaKnown RBP11.38□□□□□ -0.59
TMEM260-206ENST00000555046 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
TMEM260-206ENST00000555046 KCNA5P22460 613 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 OR1D2P34982 312 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 CLCN4P51793 760 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 PMS1P54277 932 aaKnown RBP11.38□□□□□ -0.59
TMEM260-206ENST00000555046 TNNC1P63316 161 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 NCOA4Q13772 614 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 ZACNQ401N2 412 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 CCDC40Q4G0X9 1142 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 WDR44Q5JSH3 913 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 KRT39Q6A163 491 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 SLC8B1Q6J4K2 584 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 TTI2Q6NXR4 508 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 ANKRD54Q6NXT1 300 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 PRSS55Q6UWB4 352 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-206ENST00000555046 RBM43Q6ZSC3 357 aaKnown RBP11.38□□□□□ -0.59
TMEM260-206ENST00000555046 PALB2Q86YC2 1186 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 FAM114A1Q8IWE2 563 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 DCP1BQ8IZD4 617 aaKnown RBP11.38□□□□□ -0.59
TMEM260-206ENST00000555046 SLC22A17Q8WUG5 538 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 MMS19Q96T76 1030 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 CLSTN3Q9BQT9 956 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 SRRTQ9BXP5 876 aaKnown RBP11.38□□□□□ -0.59
TMEM260-206ENST00000555046 NAT10Q9H0A0 1025 aaKnown RBP11.38□□□□□ -0.59
TMEM260-206ENST00000555046 TMEM8AQ9HCN3 771 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 CD207Q9UJ71 328 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 CTNND2Q9UQB3 1225 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 PCDHGC5Q9Y5F6 944 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 SNX9Q9Y5X1 595 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 HCFC2Q9Y5Z7 792 aa11.38□□□□□ -0.59
TMEM260-206ENST00000555046 FRYLO94915 3013 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 I3L4J1 428 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 TBC1D4O60343 1298 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 N4BP1O75113 896 aaKnown RBP11.37□□□□□ -0.59
TMEM260-206ENST00000555046 CST3P01034 146 aaPredicted RBP11.37□□□□□ -0.59
TMEM260-206ENST00000555046 PCSK1P29120 753 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 WNT7BP56706 349 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 MYL7Q01449 175 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 KCNC3Q14003 757 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 KLHL40Q2TBA0 621 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 WDR72Q3MJ13 1102 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 ATAT1Q5SQI0 421 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 LIN9Q5TKA1 542 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 TCERG1LQ5VWI1 586 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 LMBRD2Q68DH5 695 aaPredicted RBP11.37□□□□□ -0.59
TMEM260-206ENST00000555046 LLGL2Q6P1M3 1020 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 LILRA6Q6PI73 481 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 SV2AQ7L0J3 742 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 TTC39CQ8N584 583 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 KREMEN2Q8NCW0 462 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.37□□□□□ -0.59
TMEM260-206ENST00000555046 C2orf15Q8WU43 125 aaKnown RBP11.37□□□□□ -0.59
TMEM260-206ENST00000555046 ZNF516Q92618 1163 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 BORCS6Q96GS4 357 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 B3GALT6Q96L58 329 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 NECTIN4Q96NY8 510 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 PRRX2Q99811 253 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 VRTNQ9H8Y1 702 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 ZDHHC7Q9NXF8 308 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 MAGEC2Q9UBF1 373 aaPredicted RBP11.37□□□□□ -0.59
TMEM260-206ENST00000555046 SIX4Q9UIU6 781 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 FBXL5Q9UKA1 691 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 CDY1Q9Y6F8 540 aa11.37□□□□□ -0.59
TMEM260-206ENST00000555046 TRIM49BA6NDI0 452 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 PRR23AA6NEV1 266 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 SPTLC1O15269 473 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 PMM2O15305 246 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 P4HA2O15460 535 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 TGM5O43548 720 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 CLSTN1O94985 981 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 HNRNPA1P09651 372 aaKnown RBP eCLIP11.36□□□□□ -0.59
TMEM260-206ENST00000555046 ATF2P15336 505 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 GTF2F1P35269 517 aaKnown RBP eCLIP11.36□□□□□ -0.59
TMEM260-206ENST00000555046 GNL1P36915 607 aaPredicted RBP11.36□□□□□ -0.59
TMEM260-206ENST00000555046 STX17P56962 302 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 DLG4P78352 724 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 TSPY1Q01534 308 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms