RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 TCF20Q9UGU0 1960 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 A0A1W2PQC6 194 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 GABRDO14764 452 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 PPEF2O14830 753 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 FSCN2O14926 492 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 NCK2O43639 380 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 ARHGEF15O94989 841 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 OAZ2O95190 189 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 SRGAP2BP0DMP2 458 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 ATP1A3P13637 1013 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 WARSP23381 471 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 TKTP29401 623 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 BRCC3P46736 316 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 NDUFV1P49821 464 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 MFAP3P55082 362 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 FANCCQ00597 558 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 TSPY1Q01534 308 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 INCA1Q0VD86 236 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 TRIM14Q14142 442 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 MRPL58Q14197 206 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 PTPN14Q15678 1187 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 VARS2Q5ST30 1063 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 SARM1Q6SZW1 724 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 CD300LGQ6UXG3 332 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 APTXQ7Z2E3 356 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 CEP57Q86XR8 500 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 DCP1BQ8IZD4 617 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 PPM1KQ8N3J5 372 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 LMO3Q8TAP4 145 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 C2orf15Q8WU43 125 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 BCL7CQ8WUZ0 217 aaPredicted RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 TCF25Q9BQ70 676 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 ACBD6Q9BR61 282 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 NUP58Q9BVL2 599 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 INTS2Q9H0H0 1204 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 SNX25Q9H3E2 840 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 RXFP1Q9HBX9 757 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 ALG13Q9NP73 1137 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 RTN4Q9NQC3 1192 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 HSFX1Q9UBD0 423 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 MTRRQ9UBK8 725 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 CACNG4Q9UBN1 327 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 NXF1Q9UBU9 619 aaKnown RBP8.62□□□□□ -1.03
LINC01397-201ENST00000554808 DOCK6Q96HP0 2047 aa8.62□□□□□ -1.03
LINC01397-201ENST00000554808 ATP8B3O60423 1300 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.61□□□□□ -1.03
LINC01397-201ENST00000554808 SPTLC1O15269 473 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 GRM6O15303 877 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 FOSL2P15408 326 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 PON1P27169 355 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 ASPAP45381 313 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 CUL2Q13617 745 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 NFE2Q16621 373 aaPredicted RBP8.61□□□□□ -1.03
LINC01397-201ENST00000554808 SOWAHAQ2M3V2 549 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 CTXN3Q4LDR2 81 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 FIGNQ5HY92 759 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 KIAA0319Q5VV43 1072 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 TPGS2Q68CL5 300 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 SLC8B1Q6J4K2 584 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 PDCL2Q8N4E4 241 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 MRPL43Q8N983 215 aaKnown RBP8.61□□□□□ -1.03
LINC01397-201ENST00000554808 RNF214Q8ND24 703 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 NEK11Q8NG66 645 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 LNX1Q8TBB1 728 aaPredicted RBP8.61□□□□□ -1.03
LINC01397-201ENST00000554808 MICAL1Q8TDZ2 1067 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 GDPD5Q8WTR4 605 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 HDAC7Q8WUI4 952 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 RIN2Q8WYP3 895 aaPredicted RBP8.61□□□□□ -1.03
LINC01397-201ENST00000554808 RABGGTAQ92696 567 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 SEMA4DQ92854 862 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 VN1R3Q9BXE9 311 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 EDEM3Q9BZQ6 932 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 NSUN3Q9H649 340 aaKnown RBP8.61□□□□□ -1.03
LINC01397-201ENST00000554808 PRDM6Q9NQX0 595 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 CDH9Q9ULB4 789 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 MYO6Q9UM54 1294 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 BARX2Q9UMQ3 279 aaPredicted RBP8.61□□□□□ -1.03
LINC01397-201ENST00000554808 L1RE1Q9UN81 338 aa8.61□□□□□ -1.03
LINC01397-201ENST00000554808 ITIH6Q6UXX5 1313 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 C2orf71A6NGG8 1288 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 A8MXQ7 604 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 F8W810 466 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 RBAK-RBAKDNI3L0D1 243 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 TBC1D4O60343 1298 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 LILRB3O75022 631 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 CXCL14O95715 111 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 TPM1P09493 284 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 CCDC172P0C7W6 258 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 CPB1P15086 417 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 UCHL3P15374 230 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 CA8P35219 290 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 GNL1P36915 607 aaPredicted RBP8.6□□□□□ -1.03
LINC01397-201ENST00000554808 BPIFB4P59827 614 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 NR1I3Q14994 352 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 SYCP1Q15431 976 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 STILQ15468 1287 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 RTP2Q5QGT7 225 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 PLPP4Q5VZY2 271 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 WSCD1Q658N2 575 aa8.6□□□□□ -1.03
LINC01397-201ENST00000554808 C4orf50Q6ZRC1 276 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms