RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SNX3O60493 162 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 PIAS1O75925 651 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 CD19P15391 556 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 STAT5BP51692 787 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 TRPC3Q13507 836 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 TREML2Q5T2D2 321 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 PNMA8AQ86V59 439 aaPredicted RBP16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 TMEM121Q9BTD3 319 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 VPS37BQ9H9H4 285 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 CISHQ9NSE2 258 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 HOXC10Q9NYD6 342 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 ADAMTS5Q9UNA0 930 aa16.59■□□□□ 0.25
ARHGEF40-203ENST00000554514 EXOC1LA0A1B0GW35 172 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 SGK1O00141 431 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 LIASO43766 372 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 UBOX5O94941 541 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 KRT19P08727 400 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 MMP8P22894 467 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 KLRC2P26717 231 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 TCF7P36402 384 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 RAP1GAPP47736 663 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 ITIH4Q14624 930 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 SNCBQ16143 134 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 KCNT1Q5JUK3 1230 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 RNF149Q8NC42 400 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 CCDC77Q9BR77 488 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 NKIRAS1Q9NYS0 192 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 GGA3Q9NZ52 723 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 TJP2Q9UDY2 1190 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 AFG3L2Q9Y4W6 797 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 PARP14Q460N5 1801 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 ADCY3O60266 1144 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 RPS12P25398 132 aaKnown RBP16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 E2F5Q15329 346 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 CCDC134Q9H6E4 229 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 KIF9Q9HAQ2 790 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 AGAP1Q9UPQ3 857 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 ADGRA2Q96PE1 1338 aa16.58■□□□□ 0.24
ARHGEF40-203ENST00000554514 TMEM191CA6NGB0 347 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 C19orf81C9J6K1 198 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 TMEM191BP0C7N4 346 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 PECAM1P16284 738 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 RDXP35241 583 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 ALDH5A1P51649 535 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 HIRAP54198 1017 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 DPH6Q7L8W6 267 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 ANKMY2Q8IV38 441 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 CCDC63Q8NA47 563 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 TRAPPC12Q8WVT3 735 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 TFAP2BQ92481 460 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 SGSM3Q96HU1 749 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 PPP1R16BQ96T49 567 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 R3HDMLQ9H3Y0 253 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 NRBP2Q9NSY0 501 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 DOCK1Q14185 1865 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 RLFQ13129 1914 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 FARP2O94887 1054 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 SPOCD1Q6ZMY3 1216 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 ERICH1Q86X53 443 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 RCOR2Q8IZ40 523 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 CEP120Q8N960 986 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 KLRG1Q96E93 195 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 RBM41Q96IZ5 413 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 VCPIP1Q96JH7 1222 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 BAIAP2L1Q9UHR4 511 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 ZNF112Q9UJU3 913 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 TPX2Q9ULW0 747 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 POLIQ9UNA4 740 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 AGTPBP1Q9UPW5 1226 aa16.57■□□□□ 0.24
ARHGEF40-203ENST00000554514 CDH16O75309 829 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 STAM2O75886 525 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 TJP3O95049 919 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 ASS1P00966 412 aaKnown RBP16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 BRSK2Q8IWQ3 736 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 ZBED8Q8IZ13 594 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 BBOF1Q8ND07 529 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 NLRP4Q96MN2 994 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 PIGRP01833 764 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 GHRP10912 638 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 ABCD1P33897 745 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 RHPN2Q8IUC4 686 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 C4orf33Q8N1A6 199 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 TBC1D31Q96DN5 1066 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 C12orf42Q96LP6 360 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 BTBD7Q9P203 1132 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 CSDE1O75534 798 aaKnown RBP16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 ATG7O95352 703 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 CALB1P05937 261 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 KRT15P19012 456 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 ZNF699Q32M78 642 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 KIF2BQ8N4N8 673 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 ZCCHC9Q8N567 271 aaKnown RBP16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 TMEM35BQ8NCS4 154 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 CKAP2Q8WWK9 683 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 P3H4Q92791 437 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 PNMA3Q9UL41 463 aa16.56■□□□□ 0.24
ARHGEF40-203ENST00000554514 RGPD3A6NKT7 1758 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 RGPD4Q7Z3J3 1758 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms