RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 GPR17Q13304 367 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 KNOP1Q1ED39 458 aaKnown RBP8.12□□□□□ -1.11
LINC00640-201ENST00000554409 KMT5BQ4FZB7 885 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 PABPC1LQ4VXU2 614 aaKnown RBP8.12□□□□□ -1.11
LINC00640-201ENST00000554409 RNF19BQ6ZMZ0 732 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 KRBA2Q6ZNG9 492 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 HFE2Q6ZVN8 426 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 GET4Q7L5D6 327 aaPredicted RBP8.12□□□□□ -1.11
LINC00640-201ENST00000554409 HS2ST1Q7LGA3 356 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 CBWD2Q8IUF1 395 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 WDR49Q8IV35 697 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 NELFCDQ8IXH7 590 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 LRRC52Q8N7C0 313 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 C1orf127Q8N9H9 656 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 KIAA0895Q8NCT3 520 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 GOLGA5Q8TBA6 731 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 SPATA18Q8TC71 538 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 RNF166Q96A37 237 aaPredicted RBP8.12□□□□□ -1.11
LINC00640-201ENST00000554409 MFSD14AQ96MC6 490 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 GOLPH3LQ9H4A5 285 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 KCNK12Q9HB15 430 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 CYP4F11Q9HBI6 524 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 PDE11AQ9HCR9 933 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 SLC39A2Q9NP94 309 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 EXOC1Q9NV70 894 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 INTS13Q9NVM9 706 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 DNMT3BQ9UBC3 853 aaKnown RBP8.12□□□□□ -1.11
LINC00640-201ENST00000554409 CDH7Q9ULB5 785 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 DUSP12Q9UNI6 340 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 TIMM13Q9Y5L4 95 aaPredicted RBP8.12□□□□□ -1.11
LINC00640-201ENST00000554409 INSL5Q9Y5Q6 135 aa8.12□□□□□ -1.11
LINC00640-201ENST00000554409 PTPRJQ12913 1337 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 GOLGA8CPA6NN73 597 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 CYB561D2O14569 222 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 PRPF40AO75400 957 aaKnown RBP8.11□□□□□ -1.11
LINC00640-201ENST00000554409 MICAL2O94851 1124 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 RHOBTB3O94955 611 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 VNN2O95498 520 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 RPN1P04843 607 aaKnown RBP8.11□□□□□ -1.11
LINC00640-201ENST00000554409 RHOP08100 348 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 TMEM191BP0C7N4 346 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 PTPN2P17706 415 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 POLR2BP30876 1174 aaKnown RBP8.11□□□□□ -1.11
LINC00640-201ENST00000554409 MLLT3P42568 568 aaPredicted RBP8.11□□□□□ -1.11
LINC00640-201ENST00000554409 NTHL1P78549 312 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 CYP24A1Q07973 514 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 ADCY1Q08828 1119 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 SMARCB1Q12824 385 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 DPYDQ12882 1025 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 STK4Q13043 487 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 PLD1Q13393 1074 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 TDGQ13569 410 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 HTR4Q13639 388 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 PSMD6Q15008 389 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 SNRNP35Q16560 246 aaKnown RBP8.11□□□□□ -1.11
LINC00640-201ENST00000554409 TSR1Q2NL82 804 aaKnown RBP8.11□□□□□ -1.11
LINC00640-201ENST00000554409 METTL23Q86XA0 190 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 TMEM86AQ8N2M4 240 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 FSIP1Q8NA03 581 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 XXYLT1Q8NBI6 393 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 LEMD2Q8NC56 503 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 C2orf15Q8WU43 125 aaKnown RBP8.11□□□□□ -1.11
LINC00640-201ENST00000554409 ANKRD36BP1Q96IX9 119 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 RTP3Q9BQQ7 232 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 MTMR12Q9C0I1 747 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 ZCWPW1Q9H0M4 648 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 KCNH6Q9H252 994 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 KCTD10Q9H3F6 313 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 GDPD2Q9HCC8 539 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 HCFC1R1Q9NWW0 138 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 GDAP2Q9NXN4 497 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 SIX4Q9UIU6 781 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 POLIQ9UNA4 740 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 AGAP1Q9UPQ3 857 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 HCN4Q9Y3Q4 1203 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 YIPF1Q9Y548 306 aa8.11□□□□□ -1.11
LINC00640-201ENST00000554409 ZNF318Q5VUA4 2279 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 MTMR11A4FU01 709 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 TULP1O00294 542 aaPredicted RBP8.1□□□□□ -1.11
LINC00640-201ENST00000554409 PDXKO00764 312 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 CLIC2O15247 247 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 HRO43593 1189 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 ZNF202O95125 648 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 TNNC2P02585 160 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 OR4Q2P0C623 313 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 CYP2J2P51589 502 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 EPHA5P54756 1037 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 RBP5P82980 135 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 TWF1Q12792 350 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 KCNB1Q14721 858 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 NFIL3Q16649 462 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 DUOXA2Q1HG44 320 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 SLC5A9Q2M3M2 681 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 PRSS36Q5K4E3 855 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 WSCD1Q658N2 575 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 CENPPQ6IPU0 288 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 MTSS1LQ765P7 747 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 DPH6Q7L8W6 267 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 LIMS2Q7Z4I7 341 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 SLC9A9Q8IVB4 645 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms