RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SLC26A4O43511 780 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 HNRNPCL1O60812 293 aaKnown RBP17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 CA4P22748 312 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 PKN2Q16513 984 aaKnown RBP17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 BSNDQ8WZ55 320 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 OPTNQ96CV9 577 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 KLF6Q99612 283 aaPredicted RBP17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 ZNF184Q99676 751 aaPredicted RBP17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 SYNCQ9H7C4 482 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 ARL8BQ9NVJ2 186 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 SAE1Q9UBE0 346 aaPredicted RBP17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 EXOC1LA0A1B0GW35 172 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 PRPF4O43172 522 aaKnown RBP eCLIP17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 GAS8O95995 478 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 CYP1A1P04798 512 aaPredicted RBP17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 KRT15P19012 456 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 GAD2Q05329 585 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 WDR72Q3MJ13 1102 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 GMCL1P1Q8NEA9 526 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 HELQQ8TDG4 1101 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 STMN2Q93045 179 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 FAM213AQ9BRX8 229 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 KIAA1586Q9HCI6 787 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 STX18Q9P2W9 335 aaKnown RBP17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 SUGT1Q9Y2Z0 365 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 KAT6AQ92794 2004 aa17.86■□□□□ 0.45
PPP4R3A-202ENST00000554390 GYG2O15488 501 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 LYNP07948 512 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 ATF7P17544 494 aaPredicted RBP17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 GCAP28676 217 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 SCYL3Q8IZE3 742 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 RIBC1Q8N443 379 aaPredicted RBP17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 MCUR1Q96AQ8 359 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 ACCSQ96QU6 501 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 TMEM39BQ9GZU3 492 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 RPS6KL1Q9Y6S9 549 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 GREB1LQ9C091 1923 aaPredicted RBP17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 DENND3A2RUS2 1198 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 GOLGA8RI6L899 631 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 RAD17O75943 681 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 MTA2O94776 668 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 MMP10P09238 476 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 HARSP12081 509 aaKnown RBP17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 YWHABP31946 246 aaKnown RBP17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 NEK3P51956 506 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 HHATQ5VTY9 493 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 SV2AQ7L0J3 742 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 SDCCAG8Q86SQ7 713 aaPredicted RBP17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 ZNF75CPQ92670 426 aaPredicted RBP17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 SMC6Q96SB8 1091 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 CCPG1Q9ULG6 757 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 WASF2Q9Y6W5 498 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 TESPA1A2RU30 521 aaPredicted RBP17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 VPS52Q8N1B4 723 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 STRA6Q9BX79 667 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 SPATA16Q9BXB7 569 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 VCX3BQ9H321 246 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 ZWILCHQ9H900 591 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 VCX3AQ9NNX9 186 aa17.85■□□□□ 0.45
PPP4R3A-202ENST00000554390 GRIN3BO60391 1043 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 ZWINTO95229 277 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 IFNB1P01574 187 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 VIL1P09327 827 aaKnown RBP17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 NRLP54845 237 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 NR1H3Q13133 447 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 P3H1Q32P28 736 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 ZNF394Q53GI3 561 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 FYB2Q5VWT5 728 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 IZUMO3Q5VZ72 239 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 SYDE1Q6ZW31 735 aaPredicted RBP17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 RAVER2Q9HCJ3 691 aaKnown RBP17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 KANSL3Q9P2N6 904 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 SEL1LQ9UBV2 794 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 SCN9AQ15858 1988 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 SIPA1L1O43166 1804 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 MAGEA4P43358 317 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 ACOT2P49753 483 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 NOP14P78316 857 aaKnown RBP17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 OVGP1Q12889 678 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 GSTA3Q16772 222 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 PABPC1LQ4VXU2 614 aaKnown RBP17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 RFX8Q6ZV50 586 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 ANKMY2Q8IV38 441 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 SEPT12Q8IYM1 358 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 ARHGAP18Q8N392 663 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 RFWD2Q8NHY2 731 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 SHC3Q92529 594 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 PTCD3Q96EY7 689 aaKnown RBP17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 SAYSD1Q9NPB0 183 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 ZNF212Q9UDV6 495 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 GTF3C4Q9UKN8 822 aa17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 SMG5Q9UPR3 1016 aaKnown RBP17.84■□□□□ 0.45
PPP4R3A-202ENST00000554390 PDLIM1O00151 329 aa17.83■□□□□ 0.45
PPP4R3A-202ENST00000554390 HAUS5O94927 633 aa17.83■□□□□ 0.45
PPP4R3A-202ENST00000554390 PLS3P13797 630 aa17.83■□□□□ 0.45
PPP4R3A-202ENST00000554390 MFAP3P55082 362 aa17.83■□□□□ 0.45
PPP4R3A-202ENST00000554390 LVRNQ6Q4G3 990 aa17.83■□□□□ 0.45
PPP4R3A-202ENST00000554390 GRK7Q8WTQ7 553 aa17.83■□□□□ 0.45
PPP4R3A-202ENST00000554390 DDX1Q92499 740 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms