RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PEX10O60683 326 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 TACC1O75410 805 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 GJB6O95452 261 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 BAG3O95817 575 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 HPXP02790 462 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 RPN1P04843 607 aaKnown RBP6.45□□□□□ -1.38
VPS33B-203ENST00000554264 CHGBP05060 677 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 GSNP06396 782 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 ITGA4P13612 1032 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 HNRNPH3P31942 346 aaKnown RBP6.45□□□□□ -1.38
VPS33B-203ENST00000554264 ARHGAP25P42331 645 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 EPHB4P54760 987 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 VSNL1P62760 191 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 SETQ01105 290 aaPredicted RBP6.45□□□□□ -1.38
VPS33B-203ENST00000554264 KIF5AQ12840 1032 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 SNX17Q15036 470 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 SEC23AQ15436 765 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 FKBP15Q5T1M5 1219 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 IFIT1BQ5T764 474 aaKnown RBP6.45□□□□□ -1.38
VPS33B-203ENST00000554264 WDR78Q5VTH9 848 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 RRAGBQ5VZM2 374 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 ICE2Q659A1 982 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 SLC39A5Q6ZMH5 540 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 TMTC3Q6ZXV5 915 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 ADAT2Q7Z6V5 191 aaKnown RBP6.45□□□□□ -1.38
VPS33B-203ENST00000554264 KIAA1328Q86T90 577 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 FAM178BQ8IXR5 827 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 RNF10Q8N5U6 811 aaKnown RBP6.45□□□□□ -1.38
VPS33B-203ENST00000554264 MAGEB6Q8N7X4 407 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 MB21D1Q8N884 522 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 ZNF384Q8TF68 577 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 NELFBQ8WX92 580 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 BADQ92934 168 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 C12orf42Q96LP6 360 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 FCRL3Q96P31 734 aaPredicted RBP6.45□□□□□ -1.38
VPS33B-203ENST00000554264 RUFY1Q96T51 708 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 PNKPQ96T60 521 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 LZTS2Q9BRK4 669 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 TANGO6Q9C0B7 1094 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 CCSER1Q9C0I3 900 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 FAM204AQ9H8W3 233 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 CABP5Q9NP86 173 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 AP5S1Q9NUS5 200 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 WHRNQ9P202 907 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 RSPH14Q9UHP6 348 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 PUF60Q9UHX1 559 aaKnown RBP6.45□□□□□ -1.38
VPS33B-203ENST00000554264 ZBTB21Q9ULJ3 1066 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 HPCAL4Q9UM19 191 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 DIS3Q9Y2L1 958 aaKnown RBP6.45□□□□□ -1.38
VPS33B-203ENST00000554264 SLC4A4Q9Y6R1 1079 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 ATP8B3O60423 1300 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 TNKSO95271 1327 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 ATAD5Q96QE3 1844 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 SSU72P8A0A1W2PR75 194 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 ANKRD34BA5PLL1 514 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 GOLGA6BA6NDN3 693 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 ZNF503-AS2A6NEH8 195 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.44□□□□□ -1.38
VPS33B-203ENST00000554264 STRNO43815 780 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 CNMDO75829 334 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 PRPF6O94906 941 aaKnown RBP6.44□□□□□ -1.38
VPS33B-203ENST00000554264 RHOBTB3O94955 611 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 HLA-DOAP06340 250 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 CYBAP13498 195 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 JUNBP17275 347 aaPredicted RBP6.44□□□□□ -1.38
VPS33B-203ENST00000554264 STAT6P42226 847 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 PAFAH1B1P43034 410 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 VAV2P52735 878 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 UBXN1Q04323 297 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 DRP2Q13474 957 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 GRB14Q14449 540 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 TRIM60Q495X7 471 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 CCDC122Q5T0U0 273 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 GJC2Q5T442 439 aaPredicted RBP6.44□□□□□ -1.38
VPS33B-203ENST00000554264 EMC10Q5UCC4 262 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 LBX2Q6XYB7 198 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 YTHDF3Q7Z739 585 aaKnown RBP6.44□□□□□ -1.38
VPS33B-203ENST00000554264 TAX1BP1Q86VP1 789 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 ADSSL1Q8N142 457 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 ARHGEF39Q8N4T4 335 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 CAGE1Q8TC20 777 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 SH3RF3Q8TEJ3 882 aaPredicted RBP6.44□□□□□ -1.38
VPS33B-203ENST00000554264 SECISBP2LQ93073 1101 aaKnown RBP6.44□□□□□ -1.38
VPS33B-203ENST00000554264 CAVIN3Q969G5 261 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 JAKMIP2Q96AA8 810 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 RNPC3Q96LT9 517 aaKnown RBP6.44□□□□□ -1.38
VPS33B-203ENST00000554264 ERGIC2Q96RQ1 377 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 CEP89Q96ST8 783 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 DNAJC18Q9H819 358 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 EPB41L4AQ9HCS5 686 aaPredicted RBP6.44□□□□□ -1.38
VPS33B-203ENST00000554264 PDLIM7Q9NR12 457 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 GJB4Q9NTQ9 266 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 EXOC1Q9NV70 894 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 SLC5A4Q9NY91 659 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 FLRT1Q9NZU1 646 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 LRP2BPQ9P2M1 347 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 ARPP21Q9UBL0 812 aaPredicted RBP6.44□□□□□ -1.38
VPS33B-203ENST00000554264 FAN1Q9Y2M0 1017 aa6.44□□□□□ -1.38
VPS33B-203ENST00000554264 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms