RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ZSCAN18Q8TBC5 510 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 CACTINQ8WUQ7 758 aaKnown RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 PIGKQ92643 395 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 SMARCE1Q969G3 411 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 MRRFQ96E11 262 aaKnown RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 HPDLQ96IR7 371 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 MAP3K14Q99558 947 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 SPON2Q9BUD6 331 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 TRMT61BQ9BVS5 477 aaKnown RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 PHF7Q9BWX1 381 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-205ENST00000554081 OSBPL2Q9H1P3 480 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 LRRC4Q9HBW1 653 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 RGS18Q9NS28 235 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ANKEF1Q9NU02 776 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 HESX1Q9UBX0 185 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 DPP7Q9UHL4 492 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 PCDHB8Q9UN66 801 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 SIT1Q9Y3P8 196 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 WNT6Q9Y6F9 365 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 NUMBLQ9Y6R0 609 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 POLQO75417 2590 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF831Q5JPB2 1677 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 CNTNAP2Q9UHC6 1331 aa2.69□□□□□ -1.98
PRPF39-205ENST00000554081 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 GRXCR2A6NFK2 248 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 C2orf71A6NGG8 1288 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 GOLGA8SH3BPF8 625 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NEMP1O14524 444 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PI15O43692 258 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NRDCO43847 1150 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 EOMESO95936 686 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 F13A1P00488 732 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SPATA31C1P0DKV0 1188 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 BMP1P13497 986 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PLS3P13797 630 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF18P17022 549 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 GNL1P36915 607 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MTHFRP42898 656 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NAMPTP43490 491 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TAF6P49848 677 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MAP3K7CLP57077 242 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ROR1Q01973 937 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CETN1Q12798 172 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 POSTNQ15063 836 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CDO1Q16878 200 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 Q4G0T1 1027 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 C2CD6Q53TS8 623 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 IL31Q6EBC2 164 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SCYL2Q6P3W7 929 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 C4orf50Q6ZRC1 276 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 BRAPQ7Z569 592 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 UBA3Q8TBC4 463 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ADAM32Q8TC27 787 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 DDI1Q8WTU0 396 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 RNF139Q8WU17 664 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 EDEM1Q92611 657 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 FBXO32Q969P5 355 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CASD1Q96PB1 797 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 KLHL5Q96PQ7 755 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CTAGE1Q96RT6 745 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CEP89Q96ST8 783 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 HSD17B14Q9BPX1 270 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 LLPHQ9BRT6 129 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MKNK1Q9BUB5 465 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 FAM117AQ9C073 453 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 DHX33Q9H6R0 707 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 LMAN1LQ9HAT1 526 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SLC38A7Q9NVC3 462 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TBX20Q9UMR3 447 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 UBQLN1Q9UMX0 589 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PCDHA7Q9UN72 937 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NR2E1Q9Y466 385 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 RBM19Q9Y4C8 960 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MYH4Q9Y623 1939 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SPG11Q96JI7 2443 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 DNAH14Q0VDD8 3507 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SPEGQ15772 3267 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PRRC2CQ9Y520 2896 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TMEM221A6NGB7 291 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 M0R296 226 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CETN3O15182 167 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 OGTO15294 1046 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SMC2O95347 1197 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TBX18O95935 607 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 BMP15O95972 392 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TPM2P07951 284 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CYP3A4P08684 503 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CLTAP09496 248 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ODC1P11926 461 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PTPN2P17706 415 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MAOBP27338 520 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 HOXA11P31270 313 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 HOXC13P31276 330 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CASP5P51878 434 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TERF1P54274 439 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MYL6P60660 151 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MBTD1Q05BQ5 628 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SOX4Q06945 474 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 EFEMP1Q12805 493 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ELAVL2Q12926 359 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms