RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 HOXC13P31276 330 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 CTHP32929 405 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 RPL9P32969 192 aaKnown RBP8.41□□□□□ -1.06
ABCD4-220ENST00000553998 STAT6P42226 847 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 SLC12A3P55017 1021 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 SOX4Q06945 474 aaPredicted RBP8.41□□□□□ -1.06
ABCD4-220ENST00000553998 E2F4Q16254 413 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 NT5DC1Q5TFE4 455 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 ELMOD1Q8N336 334 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 SHKBP1Q8TBC3 707 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 BSNDQ8WZ55 320 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 LRRC3BQ96PB8 259 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 PLIN2Q99541 437 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 MKNK1Q9BUB5 465 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 LRRC27Q9C0I9 530 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 C17orf75Q9HAS0 396 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 GOLGA2P5Q9HBQ8 144 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 PTPRHQ9HD43 1115 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 ASAH2Q9NR71 780 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 VPS45Q9NRW7 570 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 KCNG1Q9UIX4 513 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 VWA8A3KMH1 1905 aa8.41□□□□□ -1.06
ABCD4-220ENST00000553998 FASNP49327 2511 aaKnown RBP8.4□□□□□ -1.06
ABCD4-220ENST00000553998 A0A087WWV3 80 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 A0A087X0B3 334 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 SLC38A8A6NNN8 435 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 GOLGA6L22H0YM25 854 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 PODXLO00592 558 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 EXTL3O43909 919 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 RPP40O75818 363 aaKnown RBP8.4□□□□□ -1.06
ABCD4-220ENST00000553998 SLFN14P0C7P3 912 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 KCNE1P15382 129 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 PFKFB1P16118 471 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 GJA1P17302 382 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 GRM5P41594 1212 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 SYKP43405 635 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 NAMPTP43490 491 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 SOX9P48436 509 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 KPNA1P52294 538 aaPredicted RBP8.4□□□□□ -1.06
ABCD4-220ENST00000553998 EFNA5P52803 228 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 UBE2HP62256 183 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 AMPD3Q01432 767 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 TWF1Q12792 350 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 MCM6Q14566 821 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 TEAD2Q15562 447 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 ARHGAP29Q52LW3 1261 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 GLRA4Q5JXX5 417 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 HEATR6Q6AI08 1181 aaKnown RBP8.4□□□□□ -1.06
ABCD4-220ENST00000553998 RINT1Q6NUQ1 792 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 C1orf186Q6ZWK4 172 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 SV2BQ7L1I2 683 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 KBTBD6Q86V97 674 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 TMC8Q8IU68 726 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 ARID3BQ8IVW6 561 aaPredicted RBP8.4□□□□□ -1.06
ABCD4-220ENST00000553998 YAF2Q8IY57 180 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 CAMKK1Q8N5S9 505 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 PDILTQ8N807 584 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 FSIP1Q8NA03 581 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 LRRC15Q8TF66 581 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 KIFAP3Q92845 792 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 DHX58Q96C10 678 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 CCDC34Q96HJ3 373 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 SUSD3Q96L08 255 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 DRC1Q96MC2 740 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 ZMAT2Q96NC0 199 aaKnown RBP8.4□□□□□ -1.06
ABCD4-220ENST00000553998 RUSC1Q9BVN2 902 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 OXCT2Q9BYC2 517 aaPredicted RBP8.4□□□□□ -1.06
ABCD4-220ENST00000553998 TNMDQ9H2S6 317 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 SLC38A7Q9NVC3 462 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 KBTBD4Q9NVX7 518 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 ODF2LQ9ULJ1 636 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 TNFSF13BQ9Y275 285 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 USP20Q9Y2K6 914 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 GDAQ9Y2T3 454 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 CITO14578 2027 aa8.4□□□□□ -1.06
ABCD4-220ENST00000553998 PDCD11Q14690 1871 aaKnown RBP8.39□□□□□ -1.07
ABCD4-220ENST00000553998 PHLPP2Q6ZVD8 1323 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 A0A1B0GVL5 298 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 POLR2DO15514 142 aaKnown RBP8.39□□□□□ -1.07
ABCD4-220ENST00000553998 ATG13O75143 517 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 OAZ2O95190 189 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 VNN2O95498 520 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 MYL1P05976 194 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 MYL4P12829 197 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 SCP2P22307 547 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 MPLP40238 635 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 NDUFA8P51970 172 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 PLCB2Q00722 1185 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 CACNB1Q02641 598 aaPredicted RBP8.39□□□□□ -1.07
ABCD4-220ENST00000553998 PON2Q15165 354 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 PPP2R5AQ15172 486 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 PLK5Q496M5 336 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 CTXN3Q4LDR2 81 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 ATF7IP2Q5U623 682 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 RNF43Q68DV7 783 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 ZNF280DQ6N043 979 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 PSAPL1Q6NUJ1 521 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 CNNM4Q6P4Q7 775 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 RNF19BQ6ZMZ0 732 aa8.39□□□□□ -1.07
ABCD4-220ENST00000553998 MAEAQ7L5Y9 396 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms