RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ASB3Q9Y575 518 aa9.92□□□□□ -0.82
PRKCH-208ENST00000553846 NAV2Q8IVL1 2488 aa9.92□□□□□ -0.82
PRKCH-208ENST00000553846 PHLPP2Q6ZVD8 1323 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 UPK3BL1B0FP48 263 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 UPK3BL2E5RIL1 263 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 NEMFO60524 1076 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 DTNBO60941 627 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 ATG13O75143 517 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 CDC45O75419 566 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 SOAT2O75908 522 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 BAG4O95429 457 aaKnown RBP9.91□□□□□ -0.82
PRKCH-208ENST00000553846 APBB3O95704 486 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 CPB1P15086 417 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 ATF6P18850 670 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 BCKDHBP21953 392 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 LRPAP1P30533 357 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 IRX4P78413 519 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 CYP4F8P98187 520 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 SCRN1Q12765 414 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 PLD1Q13393 1074 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 ELF2Q15723 593 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 ZBTB6Q15916 424 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 SLC10A6Q3KNW5 377 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 ZNF568Q3ZCX4 644 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 GPR158Q5T848 1215 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 TRIM68Q6AZZ1 485 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 KIAA1211LQ6NV74 962 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 RUFY3Q7L099 469 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 RASSF3Q86WH2 238 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 ATAD1Q8NBU5 361 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 DEPTORQ8TB45 409 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 FAM200AQ8TCP9 573 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 PGLYRP2Q96PD5 576 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 BBC3Q96PG8 261 aaPredicted RBP9.91□□□□□ -0.82
PRKCH-208ENST00000553846 LARP6Q9BRS8 491 aaKnown RBP9.91□□□□□ -0.82
PRKCH-208ENST00000553846 SLC46A2Q9BY10 475 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 HSFX1Q9UBD0 423 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 EVLQ9UI08 416 aaPredicted RBP9.91□□□□□ -0.82
PRKCH-208ENST00000553846 TPCN1Q9ULQ1 816 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 PLXNB3Q9ULL4 1909 aa9.91□□□□□ -0.82
PRKCH-208ENST00000553846 OR6C75A6NL08 312 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 CPLX1O14810 134 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 RHOBTB1O94844 696 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 MCF2P10911 925 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 FDPSP14324 419 aaKnown RBP9.9□□□□□ -0.82
PRKCH-208ENST00000553846 ARSAP15289 507 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 LIG1P18858 919 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 GABRR2P28476 465 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 MCM4P33991 863 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 EPHB3P54753 998 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 YWHAHQ04917 246 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-208ENST00000553846 GRSF1Q12849 480 aaKnown RBP eCLIP9.9□□□□□ -0.82
PRKCH-208ENST00000553846 MAPK7Q13164 816 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 SEMA3BQ13214 749 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 RUNX3Q13761 415 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 MYBPC2Q14324 1141 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 PPP2R5AQ15172 486 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 ECM1Q16610 540 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 PEAR1Q5VY43 1037 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-208ENST00000553846 HAUS6Q7Z4H7 955 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 OR10T2Q8NGX3 314 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 OLIG1Q8TAK6 271 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 USP13Q92995 863 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-208ENST00000553846 CCDC43Q96MW1 224 aaKnown RBP9.9□□□□□ -0.82
PRKCH-208ENST00000553846 NACC1Q96RE7 527 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 CCDC94Q9BW85 323 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-208ENST00000553846 OXCT2Q9BYC2 517 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-208ENST00000553846 EBF3Q9H4W6 596 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 POLD4Q9HCU8 107 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 GKN1Q9NS71 199 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 SLC27A5Q9Y2P5 690 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 NUB1Q9Y5A7 615 aa9.9□□□□□ -0.82
PRKCH-208ENST00000553846 TIMM13Q9Y5L4 95 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-208ENST00000553846 ANTXRLA6NF34 631 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 KHNYNO15037 678 aaKnown RBP9.89□□□□□ -0.83
PRKCH-208ENST00000553846 FAM189A1O60320 539 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 MARCH6O60337 910 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 FGF19O95750 216 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 HMGA1P17096 107 aaKnown RBP9.89□□□□□ -0.83
PRKCH-208ENST00000553846 DRD1P21728 446 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 RPA1P27694 616 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 TXKP42681 527 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 NPTX2P47972 431 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 YARSP54577 528 aaKnown RBP9.89□□□□□ -0.83
PRKCH-208ENST00000553846 OSTNP61366 133 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 DMC1Q14565 340 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 FBXO43Q4G163 708 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 RAB44Q7Z6P3 723 aaPredicted RBP9.89□□□□□ -0.83
PRKCH-208ENST00000553846 PDZD3Q86UT5 571 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 CMTM8Q8IZV2 173 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 RPLP0P6Q8NHW5 317 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 LPIN3Q9BQK8 851 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 TARS2Q9BW92 718 aaKnown RBP9.89□□□□□ -0.83
PRKCH-208ENST00000553846 HAPLN2Q9GZV7 340 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 ATXN3LQ9H3M9 355 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 CACNA2D2Q9NY47 1150 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 SCN1AP35498 2009 aa9.89□□□□□ -0.83
PRKCH-208ENST00000553846 ASXL3Q9C0F0 2248 aa9.88□□□□□ -0.83
PRKCH-208ENST00000553846 ZNF638Q14966 1978 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms