RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 AP1G1O43747 822 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 ORC4O43929 436 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 PEX1O43933 1283 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 ALDH2P05091 517 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 RARRES1P49788 294 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 AGFG1P52594 562 aaKnown RBP4.23□□□□□ -1.73
VRK1-202ENST00000553683 ZNF135P52742 658 aaPredicted RBP4.23□□□□□ -1.73
VRK1-202ENST00000553683 MRPS35P82673 323 aaKnown RBP4.23□□□□□ -1.73
VRK1-202ENST00000553683 FGL2Q14314 439 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 MINDY4Q4G0A6 757 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 CCDC157Q569K6 752 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 FAM160B1Q5W0V3 765 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 SFRP4Q6FHJ7 346 aaPredicted RBP4.23□□□□□ -1.73
VRK1-202ENST00000553683 EPM2AIP1Q7L775 607 aaPredicted RBP4.23□□□□□ -1.73
VRK1-202ENST00000553683 USP37Q86T82 979 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 PPP1R3BQ86XI6 285 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 TCEAL8Q8IYN2 117 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 GRAMD1CQ8IYS0 662 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 ADGRG5Q8IZF4 528 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 NELL1Q92832 810 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 TNPO1Q92973 898 aaKnown RBP4.23□□□□□ -1.73
VRK1-202ENST00000553683 ZG16BQ96DA0 208 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 MOGAT1Q96PD6 335 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 CGRRF1Q99675 332 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 TINAGL1Q9GZM7 467 aaPredicted RBP4.23□□□□□ -1.73
VRK1-202ENST00000553683 RSAD1Q9HA92 442 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 VSX1Q9NZR4 365 aaPredicted RBP4.23□□□□□ -1.73
VRK1-202ENST00000553683 LRIT1Q9P2V4 623 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 MED16Q9Y2X0 877 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 INSL6Q9Y581 213 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 NR2E3Q9Y5X4 410 aa4.23□□□□□ -1.73
VRK1-202ENST00000553683 TOR1BO14657 336 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 YY2O15391 372 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 PPFIA2O75334 1257 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 GATA3P23771 443 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 CXCR5P32302 372 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 NPTX2P47972 431 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 SOX10P56693 466 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 PREPLQ4J6C6 727 aaPredicted RBP4.22□□□□□ -1.73
VRK1-202ENST00000553683 AMOTQ4VCS5 1084 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 CRB2Q5IJ48 1285 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 CHPFQ8IZ52 775 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 TMEM125Q96AQ2 219 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 LRIG1Q96JA1 1093 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 TAAR9Q96RI9 348 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 ALG8Q9BVK2 526 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 C1orf43Q9BWL3 253 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 TMEM60Q9H2L4 133 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 SYNPO2LQ9H987 977 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 CNNM1Q9NRU3 951 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 PIH1D1Q9NWS0 290 aaKnown RBP4.22□□□□□ -1.73
VRK1-202ENST00000553683 FOXJ2Q9P0K8 574 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 GABBR1Q9UBS5 961 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 TCEAL9Q9UHQ7 104 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 PLEKHM1Q9Y4G2 1056 aa4.22□□□□□ -1.73
VRK1-202ENST00000553683 A0A0B4J269 797 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 WDR27A2RRH5 827 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 TUSC2O75896 110 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 UBXN7O94888 489 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 PIM1P11309 404 aaPredicted RBP4.21□□□□□ -1.74
VRK1-202ENST00000553683 CYP2C9P11712 490 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 XRCC6P12956 609 aaKnown RBP eCLIP4.21□□□□□ -1.74
VRK1-202ENST00000553683 ITGALP20701 1170 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 VIPR2P41587 438 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 CACNA2D1P54289 1103 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 ELLP55199 621 aaPredicted RBP4.21□□□□□ -1.74
VRK1-202ENST00000553683 PSMC1P62191 440 aaKnown RBP4.21□□□□□ -1.74
VRK1-202ENST00000553683 RAB1AP62820 205 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 TUBB3Q13509 450 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 PPP2R5AQ15172 486 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 SF3B3Q15393 1217 aaKnown RBP4.21□□□□□ -1.74
VRK1-202ENST00000553683 ANO6Q4KMQ2 910 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 STRIP1Q5VSL9 837 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 TPH2Q8IWU9 490 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 FAM9AQ8IZU1 332 aaPredicted RBP4.21□□□□□ -1.74
VRK1-202ENST00000553683 FAM109AQ8N4B1 249 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 SLC44A3Q8N4M1 653 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 CAMKK1Q8N5S9 505 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 PSD4Q8NDX1 1056 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 SIMC1Q8NDZ2 872 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 GPR150Q8NGU9 434 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 KBTBD7Q8WVZ9 684 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 RUNDC1Q96C34 613 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 METTL14Q9HCE5 456 aaKnown RBP4.21□□□□□ -1.74
VRK1-202ENST00000553683 C1orf112Q9NSG2 853 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 SLC17A6Q9P2U8 582 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 RGS17Q9UGC6 210 aaPredicted RBP4.21□□□□□ -1.74
VRK1-202ENST00000553683 PCDHA1Q9Y5I3 950 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 RAD54BQ9Y620 910 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 EID1Q9Y6B2 187 aa4.21□□□□□ -1.74
VRK1-202ENST00000553683 POLR2AP24928 1970 aaKnown RBP4.2□□□□□ -1.74
VRK1-202ENST00000553683 GOLGA6CA6NDK9 693 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 GOLGA6BA6NDN3 693 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 FRS3O43559 492 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 MARCH6O60337 910 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 PROP1O75360 226 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 ATXN1LP0C7T5 689 aaKnown RBP4.2□□□□□ -1.74
VRK1-202ENST00000553683 GOLGA6DP0CG33 693 aa4.2□□□□□ -1.74
VRK1-202ENST00000553683 WT1P19544 449 aaPredicted RBP4.2□□□□□ -1.74
VRK1-202ENST00000553683 BMP5P22003 454 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms