RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CEP89Q96ST8 783 aa5.47□□□□□ -1.53
VTI1B-202ENST00000553619 KIAA1586Q9HCI6 787 aa5.47□□□□□ -1.53
VTI1B-202ENST00000553619 XPNPEP1Q9NQW7 623 aa5.47□□□□□ -1.53
VTI1B-202ENST00000553619 FANCLQ9NW38 375 aa5.47□□□□□ -1.53
VTI1B-202ENST00000553619 PPM1HQ9ULR3 514 aa5.47□□□□□ -1.53
VTI1B-202ENST00000553619 TBX20Q9UMR3 447 aa5.47□□□□□ -1.53
VTI1B-202ENST00000553619 CTNND2Q9UQB3 1225 aa5.47□□□□□ -1.53
VTI1B-202ENST00000553619 AKT3Q9Y243 479 aa5.47□□□□□ -1.53
VTI1B-202ENST00000553619 FRMD4BQ9Y2L6 1034 aa5.47□□□□□ -1.53
VTI1B-202ENST00000553619 PTCH2Q9Y6C5 1203 aa5.47□□□□□ -1.53
VTI1B-202ENST00000553619 SYNRGQ9UMZ2 1314 aa5.47□□□□□ -1.53
VTI1B-202ENST00000553619 DENND3A2RUS2 1198 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 LRRC10BA6NIK2 292 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 MAPK13O15264 365 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 SLC16A4O15374 487 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 LEFTY1O75610 366 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 PGK1P00558 417 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 ASGR1P07306 291 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 ZNF286BP0CG31 522 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 SRGAP2CP0DJJ0 459 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 SMIM10L2AP0DMW4 78 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 SMIM10L2BP0DMW5 78 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 MYBP10242 640 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 EPB41P11171 864 aaKnown RBP5.46□□□□□ -1.54
VTI1B-202ENST00000553619 CYP2C9P11712 490 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 KRT13P13646 458 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 GARTP22102 1010 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 GLRA2P23416 452 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 ARNTP27540 789 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 AXLP30530 894 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 PSMC2P35998 433 aaKnown RBP5.46□□□□□ -1.54
VTI1B-202ENST00000553619 CD96P40200 585 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 MTIF2P46199 727 aaKnown RBP5.46□□□□□ -1.54
VTI1B-202ENST00000553619 FANCCQ00597 558 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 LAMTOR4Q0VGL1 99 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 MAPK7Q13164 816 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 NCAPHQ15003 741 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 LRRC14Q15048 493 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 MAPK6Q16659 721 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 KYAT1Q16773 422 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 CCDC40Q4G0X9 1142 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 FKBP15Q5T1M5 1219 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 TTI2Q6NXR4 508 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 SARM1Q6SZW1 724 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.46□□□□□ -1.54
VTI1B-202ENST00000553619 FRMD5Q7Z6J6 570 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 PDZD3Q86UT5 571 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 SESTD1Q86VW0 696 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 NELFCDQ8IXH7 590 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 C12orf56Q8IXR9 622 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 DRC7Q8IY82 874 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 DAW1Q8N136 415 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 TMEM161BQ8NDZ6 487 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 NETO1Q8TDF5 533 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 STK35Q8TDR2 534 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 TMEM174Q8WUU8 243 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 SCFD1Q8WVM8 642 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 KAT2BQ92831 832 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 IQCDQ96DY2 449 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 MISP3Q96FF7 219 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 BICD1Q96G01 975 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 SCLT1Q96NL6 688 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 SH2D3AQ9BRG2 576 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 STRA6Q9BX79 667 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 NFKBIZQ9BYH8 718 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 GCOM2Q9BZD3 368 aaPredicted RBP5.46□□□□□ -1.54
VTI1B-202ENST00000553619 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.46□□□□□ -1.54
VTI1B-202ENST00000553619 KCTD10Q9H3F6 313 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 POLD4Q9HCU8 107 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 SETD4Q9NVD3 440 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 PRMT7Q9NVM4 692 aaPredicted RBP5.46□□□□□ -1.54
VTI1B-202ENST00000553619 PCOLCE2Q9UKZ9 415 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 TELO2Q9Y4R8 837 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.46□□□□□ -1.54
VTI1B-202ENST00000553619 ARID2Q68CP9 1835 aa5.46□□□□□ -1.54
VTI1B-202ENST00000553619 ARID1BQ8NFD5 2236 aaPredicted RBP5.46□□□□□ -1.54
VTI1B-202ENST00000553619 A0A0U1RQG5 324 aaPredicted RBP5.45□□□□□ -1.54
VTI1B-202ENST00000553619 MBLAC1A4D2B0 266 aaPredicted RBP5.45□□□□□ -1.54
VTI1B-202ENST00000553619 TMEM150BA6NC51 233 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 KCNJ18B7U540 433 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 N4BP3O15049 544 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 SLC16A3O15427 465 aaKnown RBP5.45□□□□□ -1.54
VTI1B-202ENST00000553619 TLR3O15455 904 aaKnown RBP5.45□□□□□ -1.54
VTI1B-202ENST00000553619 ADCY6O43306 1168 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 NRDCO43847 1150 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 STX10O60499 249 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 EXOC3O60645 756 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 C22orf31O95567 290 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 ADCY5O95622 1261 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 TFRCP02786 760 aaKnown RBP5.45□□□□□ -1.54
VTI1B-202ENST00000553619 TPM1P09493 284 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 CD8BP10966 210 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 NR2F2P24468 414 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 MATR3P43243 847 aaKnown RBP eCLIP5.45□□□□□ -1.54
VTI1B-202ENST00000553619 LIG4P49917 911 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 ACLYP53396 1101 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 NLRP11P59045 1033 aaKnown RBP5.45□□□□□ -1.54
VTI1B-202ENST00000553619 PTENP60484 403 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 ADAM17P78536 824 aa5.45□□□□□ -1.54
VTI1B-202ENST00000553619 POU5F1Q01860 360 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms