RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 AP5M1Q9H0R1 490 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 SLITRK6Q9H5Y7 841 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 KIAA1257Q9ULG3 409 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 L1RE1Q9UN81 338 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 AKT3Q9Y243 479 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 SCINQ9Y6U3 715 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF236Q9UL36 1845 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 LRRC37A2A6NM11 1700 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 A0A087WZ62 844 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 IGF2BP3O00425 579 aaKnown RBP eCLIP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 MAP2K7O14733 419 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF185O15231 689 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 MED7O43513 233 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 NCK2O43639 380 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 EDN1P05305 212 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 CALB1P05937 261 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 MMEP08473 750 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 PAEPP09466 180 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 RHOXF2BP0C7M4 288 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF865P0CJ78 1059 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 STAG3L1P0CL83 205 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 ABCB4P21439 1286 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 EIF4BP23588 611 aaKnown RBP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 CTNNA2P26232 953 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 GNA15P30679 374 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 GBP1P32455 592 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 TM4SF4P48230 202 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 VEGFBP49765 207 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 IGBP1P78318 339 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 NKX3-2P78367 333 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 PTP4A2Q12974 167 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF699Q32M78 642 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 BEND6Q5SZJ8 279 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 MARCH8Q5T0T0 291 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 EMBQ6PCB8 327 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 CCNI2Q6ZMN8 369 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 TLK2Q86UE8 772 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 PHF13Q86YI8 300 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 EFCAB13Q8IY85 973 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 KIAA0319LQ8IZA0 1049 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 RBBP8NLQ8NC74 664 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 OR5B17Q8NGF7 314 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 CCDC26Q8TAB7 109 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 TRAPPC12Q8WVT3 735 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 MAIP1Q8WWC4 291 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 KAT5Q92993 513 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 ACAP3Q96P50 834 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 PCDHB18PQ96TA0 734 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 RHOXF2Q9BQY4 288 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 FDXACB1Q9BRP7 624 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 MIS12Q9H081 205 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 PDZD7Q9H5P4 517 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF446Q9NWS9 450 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 STIM2Q9P246 746 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 CPA4Q9UI42 421 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 ITGA11Q9UKX5 1188 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 CEP83Q9Y592 693 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 PCDHB4Q9Y5E5 795 aa7.79□□□□□ -1.16
ATXN3-221ENST00000553498 COL11A1P12107 1806 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-221ENST00000553498 PTPRJQ12913 1337 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 PASKQ96RG2 1323 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 PTPRFP10586 1907 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-221ENST00000553498 HAS3O00219 553 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 TNPO2O14787 897 aaKnown RBP7.78□□□□□ -1.16
ATXN3-221ENST00000553498 DYNC1LI2O43237 492 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-221ENST00000553498 CA12O43570 354 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 CEP104O60308 925 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 TSPAN1O60635 241 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 DUSP11O75319 330 aaKnown RBP7.78□□□□□ -1.16
ATXN3-221ENST00000553498 TBC1D8O95759 1140 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF286BP0CG31 522 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 HARSP12081 509 aaKnown RBP7.78□□□□□ -1.16
ATXN3-221ENST00000553498 AKR1A1P14550 325 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 CDH5P33151 784 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-221ENST00000553498 MAN1A1P33908 653 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 CTNNA1P35221 906 aaKnown RBP7.78□□□□□ -1.16
ATXN3-221ENST00000553498 SOX11P35716 441 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 TNFSF9P41273 254 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 EPHB4P54760 987 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 VSNL1P62760 191 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 RBP5P82980 135 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 TFAMQ00059 246 aaKnown RBP7.78□□□□□ -1.16
ATXN3-221ENST00000553498 CUL1Q13616 776 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 STILQ15468 1287 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF667Q5HYK9 610 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 ZBTB41Q5SVQ8 909 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 TAF3Q5VWG9 929 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 TAF2Q6P1X5 1199 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 SLC27A1Q6PCB7 646 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 TMEM270Q6UE05 265 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 PALB2Q86YC2 1186 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 THNSL1Q8IYQ7 743 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 MCOLN2Q8IZK6 566 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 TMEM35BQ8NCS4 154 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF564Q8TBZ8 553 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms