RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 REXO1L1PQ8IX06 675 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 ZNF555Q8NEP9 628 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 ERP27Q96DN0 273 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 FOPNLQ96NB1 174 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 ELP3Q9H9T3 547 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.06□□□□□ -0.48
SYNE2-208ENST00000553289 KIAA1210Q9ULL0 1709 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 KIF1CO43896 1103 aaKnown RBP12.06□□□□□ -0.48
SYNE2-208ENST00000553289 KYNUQ16719 465 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 AASDHQ4L235 1098 aaPredicted RBP12.06□□□□□ -0.48
SYNE2-208ENST00000553289 KDM7AQ6ZMT4 941 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 AGAP3Q96P47 875 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 NEUROG2Q9H2A3 272 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 NAGPAQ9UK23 515 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 SLC30A1Q9Y6M5 507 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 ZC3H4Q9UPT8 1303 aaKnown RBP12.06□□□□□ -0.48
SYNE2-208ENST00000553289 MAP4P27816 1152 aaKnown RBP12.06□□□□□ -0.48
SYNE2-208ENST00000553289 MMP14P50281 582 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 GRB10Q13322 594 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 MTFR1Q15390 333 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 PTGISQ16647 500 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 THEMIS2Q5TEJ8 643 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 GID8Q9NWU2 228 aa12.06□□□□□ -0.48
SYNE2-208ENST00000553289 SPATA31A6Q5VVP1 1343 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 PPRC1Q5VV67 1664 aaKnown RBP12.05□□□□□ -0.48
SYNE2-208ENST00000553289 A0A0A6YYK5 440 aaPredicted RBP12.05□□□□□ -0.48
SYNE2-208ENST00000553289 ALDH1A1P00352 501 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 ICAM1P05362 532 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 ITGA4P13612 1032 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 MAPK7Q13164 816 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 CUL2Q13617 745 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 LAMC2Q13753 1193 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 MYBPC2Q14324 1141 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 NOA1Q8NC60 698 aaKnown RBP12.05□□□□□ -0.48
SYNE2-208ENST00000553289 PABPC3Q9H361 631 aaKnown RBP12.05□□□□□ -0.48
SYNE2-208ENST00000553289 MANSC1Q9H8J5 431 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 AFF4Q9UHB7 1163 aaKnown RBP12.05□□□□□ -0.48
SYNE2-208ENST00000553289 AURKCQ9UQB9 309 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 VPS9D1Q9Y2B5 631 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 H0Y626 953 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 TRIM16O95361 564 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 RGS4P49798 205 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 KLC1Q07866 573 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 NOTUMQ6P988 496 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 AGBL3Q8NEM8 1001 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 E2F7Q96AV8 911 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 ZNF518BQ9C0D4 1074 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 GOLGA8TH3BQL2 631 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 MSH4O15457 936 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 GZMAP12544 262 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 GTF2H3Q13889 308 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 ZC3H12BQ5HYM0 836 aaKnown RBP12.05□□□□□ -0.48
SYNE2-208ENST00000553289 LVRNQ6Q4G3 990 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 TMCO5AQ8N6Q1 288 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 STKLD1Q8NE28 680 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 PIDD1Q9HB75 910 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 C20orf96Q9NUD7 363 aaPredicted RBP12.05□□□□□ -0.48
SYNE2-208ENST00000553289 RIC8BQ9NVN3 520 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 NRXN1Q9ULB1 1477 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 H2AFYO75367 372 aaKnown RBP12.05□□□□□ -0.48
SYNE2-208ENST00000553289 TADA2AO75478 443 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 KLK7P49862 253 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 MAPRE1Q15691 268 aaKnown RBP12.05□□□□□ -0.48
SYNE2-208ENST00000553289 TRIM65Q6PJ69 517 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 CLEC10AQ8IUN9 316 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 AGR3Q8TD06 166 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 KBTBD4Q9NVX7 518 aa12.05□□□□□ -0.48
SYNE2-208ENST00000553289 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.05□□□□□ -0.48
SYNE2-208ENST00000553289 EFCAB14O75071 495 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 RARBP10826 455 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 CHRNA5P30532 468 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 PLA2G4AP47712 749 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 GOLGA7BQ2TAP0 167 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 EFCAB12Q6NXP0 572 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 STX19Q8N4C7 294 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 TNIP2Q8NFZ5 429 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 CPS1P31327 1500 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 ANXA9O76027 345 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 CSPG5O95196 566 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 APOA1P02647 267 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 GARTP22102 1010 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 PON1P27169 355 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 ARMC2Q8NEN0 867 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 TEKT4Q8WW24 435 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 HPDLQ96IR7 371 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 WHRNQ9P202 907 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 TRPC5OSA6NMA1 111 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 ZNF263O14978 683 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 HSD17B3P37058 310 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 SLC29A2Q14542 456 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 PAPD7Q5XG87 772 aaKnown RBP12.04□□□□□ -0.48
SYNE2-208ENST00000553289 OR2W6PQ8NHA6 318 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 DTNBP1Q96EV8 351 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 NSL1Q96IY1 281 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 RMDN2Q96LZ7 410 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 UBQLN1Q9UMX0 589 aaKnown RBP12.04□□□□□ -0.48
SYNE2-208ENST00000553289 DIP2AQ14689 1571 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 DYNC1LI2O43237 492 aaPredicted RBP12.04□□□□□ -0.48
SYNE2-208ENST00000553289 RPS6KA5O75582 802 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms