RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 LMBRD2Q68DH5 695 aaPredicted RBP17.14■□□□□ 0.33
CDK4-215ENST00000553237 ATL3Q6DD88 541 aa17.14■□□□□ 0.33
CDK4-215ENST00000553237 PHLDB3Q6NSJ2 640 aa17.14■□□□□ 0.33
CDK4-215ENST00000553237 LRRTM3Q86VH5 581 aa17.14■□□□□ 0.33
CDK4-215ENST00000553237 CCDC105Q8IYK2 499 aa17.14■□□□□ 0.33
CDK4-215ENST00000553237 THEM5Q8N1Q8 247 aa17.14■□□□□ 0.33
CDK4-215ENST00000553237 CSGALNACT2Q8N6G5 542 aa17.14■□□□□ 0.33
CDK4-215ENST00000553237 CHAMP1Q96JM3 812 aa17.14■□□□□ 0.33
CDK4-215ENST00000553237 ZNF560Q96MR9 790 aa17.14■□□□□ 0.33
CDK4-215ENST00000553237 FOXQ1Q9C009 403 aa17.14■□□□□ 0.33
CDK4-215ENST00000553237 ZCWPW1Q9H0M4 648 aa17.14■□□□□ 0.33
CDK4-215ENST00000553237 RCOR1Q9UKL0 485 aa17.14■□□□□ 0.33
CDK4-215ENST00000553237 KRT19P08727 400 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 FCARP24071 287 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 EPHA5P54756 1037 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 BFSP1Q12934 665 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 CNNM4Q6P4Q7 775 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 UNC13DQ70J99 1090 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 DNAJB7Q7Z6W7 309 aaPredicted RBP17.13■□□□□ 0.33
CDK4-215ENST00000553237 CBWD2Q8IUF1 395 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 NELFCDQ8IXH7 590 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 GRAMD1CQ8IYS0 662 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 LEMD2Q8NC56 503 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 SHKBP1Q8TBC3 707 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 ZNF507Q8TCN5 953 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 ELSPBP1Q96BH3 223 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 ASB16Q96NS5 453 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 SEPT5Q99719 369 aaPredicted RBP17.13■□□□□ 0.33
CDK4-215ENST00000553237 LRRC3Q9BY71 257 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 MTMR12Q9C0I1 747 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 MAGEF1Q9HAY2 307 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 ZFP14Q9HCL3 533 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 HSPBP1Q9NZL4 362 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 SIT1Q9Y3P8 196 aa17.13■□□□□ 0.33
CDK4-215ENST00000553237 A0A1W2PRU2 124 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 ZNF233A6NK53 670 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 KIAA0391O15091 583 aaKnown RBP17.12■□□□□ 0.33
CDK4-215ENST00000553237 EIF3DO15371 548 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDK4-215ENST00000553237 LRRN2O75325 713 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 TMEM191BP0C7N4 346 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 PNPLA4P41247 253 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 VIPR2P41587 438 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 STARD6P59095 220 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 PFKPQ01813 784 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 CUL4BQ13620 913 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 GRM2Q14416 872 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 MLF2Q15773 248 aaPredicted RBP17.12■□□□□ 0.33
CDK4-215ENST00000553237 MGAT5BQ3V5L5 792 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 EPM2AIP1Q7L775 607 aaPredicted RBP17.12■□□□□ 0.33
CDK4-215ENST00000553237 TMC8Q8IU68 726 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 GPIHBP1Q8IV16 184 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 RDH13Q8NBN7 331 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 FAM200AQ8TCP9 573 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 SHDQ96IW2 340 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 LPIN3Q9BQK8 851 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 SLITRK6Q9H5Y7 841 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 SLC39A2Q9NP94 309 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 SERTAD1Q9UHV2 236 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 SIX4Q9UIU6 781 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 ZDHHC9Q9Y397 364 aa17.12■□□□□ 0.33
CDK4-215ENST00000553237 CLIC2O15247 247 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 TGFB1I1O43294 461 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 CD72P21854 359 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 TUFMP49411 452 aaKnown RBP17.11■□□□□ 0.33
CDK4-215ENST00000553237 RBP5P82980 135 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 ANGPT1Q15389 498 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 CEP57L1Q8IYX8 460 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 PDCL2Q8N4E4 241 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 OR5B17Q8NGF7 314 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 CXorf38Q8TB03 319 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 ZSCAN18Q8TBC5 510 aaPredicted RBP17.11■□□□□ 0.33
CDK4-215ENST00000553237 GIPC2Q8TF65 315 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 SCFD1Q8WVM8 642 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 SMARCD2Q92925 531 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 ZNF334Q9HCZ1 680 aaPredicted RBP17.11■□□□□ 0.33
CDK4-215ENST00000553237 INTS13Q9NVM9 706 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 ABI2Q9NYB9 513 aaPredicted RBP17.11■□□□□ 0.33
CDK4-215ENST00000553237 ITGA11Q9UKX5 1188 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 L1RE1Q9UN81 338 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 ASB3Q9Y575 518 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 PTPRJQ12913 1337 aa17.11■□□□□ 0.33
CDK4-215ENST00000553237 HUS1O60921 280 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 CYP2J2P51589 502 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 PRKCQQ04759 706 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 EHHADHQ08426 723 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 UBXN2BQ14CS0 331 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 STXBP5Q5T5C0 1151 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 DCP1BQ8IZD4 617 aaKnown RBP17.1■□□□□ 0.33
CDK4-215ENST00000553237 LRRC52Q8N7C0 313 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 PJA1Q8NG27 643 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 PSMG2Q969U7 264 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 ANKRD36BP1Q96IX9 119 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 TRMT61BQ9BVS5 477 aaKnown RBP17.1■□□□□ 0.33
CDK4-215ENST00000553237 ATXN3LQ9H3M9 355 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 BRD9Q9H8M2 597 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 AGPAT3Q9NRZ7 376 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 TMLHEQ9NVH6 421 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 HSFX1Q9UBD0 423 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 R3HCC1Q9Y3T6 440 aaKnown RBP17.1■□□□□ 0.33
CDK4-215ENST00000553237 MTF2Q9Y483 593 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms