RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 CYP39A1Q9NYL5 469 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 CORO1CQ9ULV4 474 aaPredicted RBP5.73□□□□□ -1.49
LIMA1-212ENST00000552491 MRPL11Q9Y3B7 192 aaKnown RBP5.73□□□□□ -1.49
LIMA1-212ENST00000552491 ZNF536O15090 1300 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 PTPRJQ12913 1337 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 DPPA5A6NC42 116 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 ENO4A6NNW6 628 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 TCP10L2B9ZVM9 353 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 DNALI1O14645 258 aaPredicted RBP5.73□□□□□ -1.49
LIMA1-212ENST00000552491 PRPF4O43172 522 aaKnown RBP eCLIP5.73□□□□□ -1.49
LIMA1-212ENST00000552491 ECE2O60344 883 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 CCNE2O96020 404 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 ACO1P21399 889 aaKnown RBP5.73□□□□□ -1.49
LIMA1-212ENST00000552491 SLC1A1P43005 524 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 HSD17B4P51659 736 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 GPX6P59796 221 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 RPL7AP62424 266 aaKnown RBP5.73□□□□□ -1.49
LIMA1-212ENST00000552491 NOP14P78316 857 aaKnown RBP5.73□□□□□ -1.49
LIMA1-212ENST00000552491 PTP4A2Q12974 167 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 MAMLD1Q13495 774 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 MTM1Q13496 603 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 SPARCL1Q14515 664 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 LAPTM4AQ15012 233 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 PDK4Q16654 411 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 WDR72Q3MJ13 1102 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 TAF1BQ53T94 588 aaPredicted RBP5.73□□□□□ -1.49
LIMA1-212ENST00000552491 FAM182AQ5T1J6 154 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 MFSD7Q6UXD7 560 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 C15orf39Q6ZRI6 1047 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 RGS9BPQ6ZS82 235 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 ANO5Q75V66 913 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 TAS1R3Q7RTX0 852 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 KATNAL2Q8IYT4 538 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 RIBC1Q8N443 379 aaPredicted RBP5.73□□□□□ -1.49
LIMA1-212ENST00000552491 STK32AQ8WU08 396 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 HAUS1Q96CS2 278 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 NUDCD1Q96RS6 583 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 WDR83Q9BRX9 315 aaKnown RBP5.73□□□□□ -1.49
LIMA1-212ENST00000552491 C10orf88Q9H8K7 445 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 EHMT1Q9H9B1 1298 aa5.73□□□□□ -1.49
LIMA1-212ENST00000552491 WDR91A4D1P6 747 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 SPDYE5A6NIY4 337 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 GOLGA8SH3BPF8 625 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 GOLGA8MH3BSY2 632 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 PPP1R12AO14974 1030 aaPredicted RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 PSTPIP1O43586 416 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 LIASO43766 372 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 LYPLA2O95372 231 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 MYBL1P10243 752 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 KRT15P19012 456 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 CA4P22748 312 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ADRA1DP25100 572 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 SSR1P43307 286 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 NSFP46459 744 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 PTDSS1P48651 473 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ARSEP51690 589 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 NOMO3P69849 1222 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 GCNT1Q02742 428 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ZNF252P-AS1Q0IIN9 211 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 OVGP1Q12889 678 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 GPS1Q13098 491 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 NR1H3Q13133 447 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 DGKZQ13574 1117 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 SETDB1Q15047 1291 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 MSS51Q4VC12 460 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 XKR9Q5GH70 373 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 LVRNQ6Q4G3 990 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 DSTYKQ6XUX3 929 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 CEP128Q6ZU80 1094 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 NLRP9Q7RTR0 991 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 GSTA5Q7RTV2 222 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 MTDHQ86UE4 582 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 NLRX1Q86UT6 975 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 TDRPQ86YL5 185 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 CCDC125Q86Z20 511 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ANKMY2Q8IV38 441 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 RHOT1Q8IXI2 618 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 AGGF1Q8N302 714 aaeCLIP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ENDOVQ8N8Q3 282 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 RFWD2Q8NHY2 731 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ASAP3Q8TDY4 903 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 CLEC4DQ8WXI8 215 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ZNF75CPQ92670 426 aaPredicted RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 INPP5DQ92835 1189 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 PTPRN2Q92932 1015 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 ZDHHC16Q969W1 377 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 IWS1Q96ST2 819 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 FAM213AQ9BRX8 229 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 OSBPL1AQ9BXW6 950 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 FOXP3Q9BZS1 431 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 YIPF3Q9GZM5 350 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 APOBEC3GQ9HC16 384 aaKnown RBP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 NPHS2Q9NP85 383 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 UBN1Q9NPG3 1134 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 SERPINA10Q9UK55 444 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 SYNPO2Q9UMS6 1093 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.72□□□□□ -1.49
LIMA1-212ENST00000552491 UBIAD1Q9Y5Z9 338 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 CLUHO75153 1309 aa5.72□□□□□ -1.49
LIMA1-212ENST00000552491 KAT6AQ92794 2004 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms