RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 SMIM28A0A1B0GU29 152 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 TUBBP07437 444 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 KCNE1P15382 129 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 MAP2K2P36507 400 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 YARSP54577 528 aaKnown RBP11.54□□□□□ -0.56
PFDN5-216ENST00000552341 GLRA4Q5JXX5 417 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 BEND6Q5SZJ8 279 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-216ENST00000552341 PPP1R2P3Q6NXS1 205 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 MMS22LQ6ZRQ5 1243 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 PHLDB2Q86SQ0 1253 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 SELENOOQ9BVL4 669 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 LHX5Q9H2C1 402 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 RNF19AQ9NV58 838 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 ANAPC7Q9UJX3 599 aa11.54□□□□□ -0.56
PFDN5-216ENST00000552341 PGRMC1O00264 195 aaKnown RBP11.53□□□□□ -0.56
PFDN5-216ENST00000552341 P4HA1P13674 534 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 CTNNA2P26232 953 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 CTNNA1P35221 906 aaKnown RBP11.53□□□□□ -0.56
PFDN5-216ENST00000552341 PTPN11Q06124 597 aaPredicted RBP11.53□□□□□ -0.56
PFDN5-216ENST00000552341 ORC1Q13415 861 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 C9orf57Q5W0N0 161 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 TMCO3Q6UWJ1 677 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 TMEM35BQ8NCS4 154 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 C1orf131Q8NDD1 294 aaKnown RBP11.53□□□□□ -0.56
PFDN5-216ENST00000552341 PXYLP1Q8TE99 480 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 TMEM176AQ96HP8 235 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 WNT8AQ9H1J5 351 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 KLK14Q9P0G3 267 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 DDX20Q9UHI6 824 aaKnown RBP11.53□□□□□ -0.56
PFDN5-216ENST00000552341 CYTH4Q9UIA0 394 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 BARX2Q9UMQ3 279 aaPredicted RBP11.53□□□□□ -0.56
PFDN5-216ENST00000552341 PCDHA3Q9Y5H8 950 aa11.53□□□□□ -0.56
PFDN5-216ENST00000552341 TMEM110-MUSTN1A8MSY1 372 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 PIRO00625 290 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 VEGFBP49765 207 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 MRPS25P82663 173 aaKnown RBP11.52□□□□□ -0.56
PFDN5-216ENST00000552341 SOX4Q06945 474 aaPredicted RBP11.52□□□□□ -0.56
PFDN5-216ENST00000552341 GLE1Q53GS7 698 aaKnown RBP11.52□□□□□ -0.56
PFDN5-216ENST00000552341 FAM47CQ5HY64 1035 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 DENND1BQ6P3S1 775 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 LRRC52Q8N7C0 313 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 BEST2Q8NFU1 509 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 RNPC3Q96LT9 517 aaKnown RBP11.52□□□□□ -0.56
PFDN5-216ENST00000552341 TSPAN18Q96SJ8 248 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 APOL6Q9BWW8 343 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 CALCOCO1Q9P1Z2 691 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 UBQLN1Q9UMX0 589 aaKnown RBP11.52□□□□□ -0.56
PFDN5-216ENST00000552341 ST3GAL5Q9UNP4 418 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 NR2E1Q9Y466 385 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 NME7Q9Y5B8 376 aa11.52□□□□□ -0.56
PFDN5-216ENST00000552341 MEIS3P2A8K0S8 358 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 PTGESO14684 152 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 RPS6KA5O75582 802 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 ZMYND10O75800 440 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 SASH3O75995 380 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 CTSHP09668 335 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 MYBL2P10244 700 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 HOXD10P28358 340 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 MYO1EQ12965 1108 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 ZNF211Q13398 564 aaPredicted RBP11.52□□□□□ -0.57
PFDN5-216ENST00000552341 LONRF2Q1L5Z9 754 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 PPP1R15BQ5SWA1 713 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 LIN9Q5TKA1 542 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 AADACL2Q6P093 401 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 RSPH3Q86UC2 560 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 PCSK9Q8NBP7 692 aaKnown RBP11.52□□□□□ -0.57
PFDN5-216ENST00000552341 GSTCDQ8NEC7 633 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 AGO3Q9H9G7 860 aaKnown RBP11.52□□□□□ -0.57
PFDN5-216ENST00000552341 ARFGAP3Q9NP61 516 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 L1RE1Q9UN81 338 aa11.52□□□□□ -0.57
PFDN5-216ENST00000552341 FRMPD3Q5JV73 1810 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 M0QZ92 97 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 O00370 1275 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 GJB6O95452 261 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 GNRH1P01148 92 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 FGGP02679 453 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 RPLP2P05387 115 aaKnown RBP11.51□□□□□ -0.57
PFDN5-216ENST00000552341 PYGMP11217 842 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 ITGA4P13612 1032 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 CD19P15391 556 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 CYP3A5P20815 502 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 NDST1P52848 882 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 RPL7AP62424 266 aaKnown RBP11.51□□□□□ -0.57
PFDN5-216ENST00000552341 TNNC1P63316 161 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 SLC7A5Q01650 507 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 PTGISQ16647 500 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 TRIM71Q2Q1W2 868 aaKnown RBP11.51□□□□□ -0.57
PFDN5-216ENST00000552341 PTPN20Q4JDL3 420 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 LHX8Q68G74 356 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 TWF2Q6IBS0 349 aaKnown RBP11.51□□□□□ -0.57
PFDN5-216ENST00000552341 C8orf74Q6P047 294 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 LIMS2Q7Z4I7 341 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 TTC39CQ8N584 583 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 UBL4BQ8N7F7 174 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 RUBCNQ92622 972 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 KRT12Q99456 494 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 HINFPQ9BQA5 517 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 MRPL45Q9BRJ2 306 aaKnown RBP11.51□□□□□ -0.57
PFDN5-216ENST00000552341 AP1M1Q9BXS5 423 aa11.51□□□□□ -0.57
PFDN5-216ENST00000552341 FUT8Q9BYC5 575 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms