RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 TMEM8BA6NDV4 472 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 EML1O00423 815 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 CITO14578 2027 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 EPN2O95208 641 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 PAPSS2O95340 614 aaPredicted RBP5.95□□□□□ -1.46
HOXB3-213ENST00000552000 IL2RAP01589 272 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 LRG1P02750 347 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 PTPN2P17706 415 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 PSMC3P17980 439 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 ARF4P18085 180 aaPredicted RBP5.95□□□□□ -1.46
HOXB3-213ENST00000552000 AXLP30530 894 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 SOX9P48436 509 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 PXNP49023 591 aaPredicted RBP5.95□□□□□ -1.46
HOXB3-213ENST00000552000 MCCD1P59942 119 aaPredicted RBP5.95□□□□□ -1.46
HOXB3-213ENST00000552000 PTENP60484 403 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 PSMC5P62195 406 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 NCBP1Q09161 790 aaKnown RBP5.95□□□□□ -1.46
HOXB3-213ENST00000552000 TUSC3Q13454 348 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 LRRC32Q14392 662 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 EMC2Q15006 297 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 NKAPLQ5M9Q1 402 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 TMCO4Q5TGY1 634 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 CREB3L3Q68CJ9 461 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 B3GNT9Q6UX72 402 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 VITQ6UXI7 678 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 FERMT3Q86UX7 667 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 KBTBD6Q86V97 674 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 WDR5BQ86VZ2 330 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 HACE1Q8IYU2 909 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 CCDC12Q8WUD4 166 aaPredicted RBP5.95□□□□□ -1.46
HOXB3-213ENST00000552000 GATA6Q92908 595 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 TRIM11Q96F44 468 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 CEP170P1Q96L14 293 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 ASB16Q96NS5 453 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 CORO1BQ9BR76 489 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 DHX33Q9H6R0 707 aaKnown RBP5.95□□□□□ -1.46
HOXB3-213ENST00000552000 TPSG1Q9NRR2 321 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 NDFIP2Q9NV92 336 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 CDY1Q9Y6F8 540 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 NBASA2RRP1 2371 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 ARID2Q68CP9 1835 aa5.95□□□□□ -1.46
HOXB3-213ENST00000552000 KLF18A0A0U1RQI7 1052 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 ARHGEF37A1IGU5 675 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 SLC38A8A6NNN8 435 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 C4orf47A7E2U8 309 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 TAF4O00268 1085 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 PRRG1O14668 218 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 ZNF263O14978 683 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 ASAP2O43150 1006 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 B4GALT5O43286 388 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 EXTL3O43909 919 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 RPP40O75818 363 aaKnown RBP5.94□□□□□ -1.46
HOXB3-213ENST00000552000 TDP2O95551 362 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 FBXO45P0C2W1 286 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 CCDC192P0DO97 292 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 GNA11P29992 359 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 ELF1P32519 619 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 MPLP40238 635 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 CCR2P41597 374 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 RAP1GAPP47736 663 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 QARSP47897 775 aaKnown RBP5.94□□□□□ -1.46
HOXB3-213ENST00000552000 RBM25P49756 843 aaKnown RBP5.94□□□□□ -1.46
HOXB3-213ENST00000552000 USP11P51784 963 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 KPNA1P52294 538 aaPredicted RBP5.94□□□□□ -1.46
HOXB3-213ENST00000552000 ELAVL2Q12926 359 aaKnown RBP5.94□□□□□ -1.46
HOXB3-213ENST00000552000 Q4G0T1 1027 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 PRSS36Q5K4E3 855 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 DGKKQ5KSL6 1271 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 SH3PXD2AQ5TCZ1 1133 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 KIAA1211LQ6NV74 962 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 PDXDC1Q6P996 788 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 TXNDC11Q6PKC3 985 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.94□□□□□ -1.46
HOXB3-213ENST00000552000 RTL10Q7L3V2 364 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 CACNA2D4Q7Z3S7 1137 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 EXOC8Q8IYI6 725 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 TTC8Q8TAM2 541 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 BICD2Q8TD16 824 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 CSGALNACT1Q8TDX6 532 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 DEPDC1BQ8WUY9 529 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 GAB3Q8WWW8 586 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 SMARCD2Q92925 531 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 LOXL4Q96JB6 756 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 ZSWIM3Q96MP5 696 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 EDEM2Q9BV94 578 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 SCNM1Q9BWG6 230 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 LSG1Q9H089 658 aaKnown RBP5.94□□□□□ -1.46
HOXB3-213ENST00000552000 CXCL16Q9H2A7 254 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 CRISPLD1Q9H336 500 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 TRPV5Q9NQA5 729 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 AVENQ9NQS1 362 aaPredicted RBP5.94□□□□□ -1.46
HOXB3-213ENST00000552000 WRAP73Q9P2S5 460 aaPredicted RBP5.94□□□□□ -1.46
HOXB3-213ENST00000552000 MTRRQ9UBK8 725 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 WASF3Q9UPY6 502 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 PCDHGC4Q9Y5F7 938 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 MGAQ8IWI9 3026 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 NCANO14594 1321 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 AHCTF1Q8WYP5 2266 aa5.94□□□□□ -1.46
HOXB3-213ENST00000552000 HEPACAM2A8MVW5 462 aa5.93□□□□□ -1.46
HOXB3-213ENST00000552000 I3L4J1 428 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms