RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ECT2Q9H8V3 914 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.78□□□□□ -0.2
CACNB3-219ENST00000551544 TMEM191CA6NGB0 347 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 ATP6V1G2O95670 118 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 TMEM191BP0C7N4 346 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 ARL2P36404 184 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 KCNJ2P63252 427 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 FASTKD3Q14CZ7 662 aaKnown RBP13.78□□□□□ -0.2
CACNB3-219ENST00000551544 TMEM63BQ5T3F8 832 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 ZNF772Q68DY9 489 aaPredicted RBP13.78□□□□□ -0.2
CACNB3-219ENST00000551544 DNAJC24Q6P3W2 148 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 FAM47EQ6ZV65 393 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 RBM41Q96IZ5 413 aaKnown RBP13.78□□□□□ -0.2
CACNB3-219ENST00000551544 ADAM33Q9BZ11 813 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 ARL2BPQ9Y2Y0 163 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 MAFBQ9Y5Q3 323 aaPredicted RBP13.78□□□□□ -0.2
CACNB3-219ENST00000551544 GJA3Q9Y6H8 435 aa13.78□□□□□ -0.2
CACNB3-219ENST00000551544 PEX10O60683 326 aa13.77□□□□□ -0.2
CACNB3-219ENST00000551544 TJP3O95049 919 aa13.77□□□□□ -0.2
CACNB3-219ENST00000551544 IFNB1P01574 187 aa13.77□□□□□ -0.2
CACNB3-219ENST00000551544 OAZ1P54368 228 aa13.77□□□□□ -0.2
CACNB3-219ENST00000551544 ZNF280AP59817 542 aaPredicted RBP13.77□□□□□ -0.2
CACNB3-219ENST00000551544 CNTN2Q02246 1040 aa13.77□□□□□ -0.2
CACNB3-219ENST00000551544 LMNB2Q03252 620 aa13.77□□□□□ -0.2
CACNB3-219ENST00000551544 ZNF252P-AS1Q0IIN9 211 aa13.77□□□□□ -0.2
CACNB3-219ENST00000551544 CFAP57Q96MR6 1250 aa13.77□□□□□ -0.2
CACNB3-219ENST00000551544 VPS37BQ9H9H4 285 aa13.77□□□□□ -0.2
CACNB3-219ENST00000551544 NOD2Q9HC29 1040 aa13.77□□□□□ -0.2
CACNB3-219ENST00000551544 PNMA3Q9UL41 463 aa13.77□□□□□ -0.2
CACNB3-219ENST00000551544 LRRD1A4D1F6 860 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 DNALI1O14645 258 aaPredicted RBP13.77□□□□□ -0.21
CACNB3-219ENST00000551544 PIGRP01833 764 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 PECAM1P16284 738 aaPredicted RBP13.77□□□□□ -0.21
CACNB3-219ENST00000551544 MYL6P60660 151 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 NCALDP61601 193 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 OGDHQ02218 1023 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 STXBP2Q15833 593 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 CYP4A22Q5TCH4 519 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 DCAF15Q66K64 600 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 SCARA5Q6ZMJ2 495 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 ANKRD35Q8N283 1001 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 KIF2BQ8N4N8 673 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 THOC1Q96FV9 657 aaKnown RBP13.77□□□□□ -0.21
CACNB3-219ENST00000551544 MAGEB18Q96M61 343 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 MTMR12Q9C0I1 747 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 CNTN6Q9UQ52 1028 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 MYH9P35579 1960 aaKnown RBP13.77□□□□□ -0.21
CACNB3-219ENST00000551544 FOXN2P32314 431 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 PSMC4P43686 418 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 GMPSP49915 693 aaPredicted RBP13.77□□□□□ -0.21
CACNB3-219ENST00000551544 TGFB2P61812 414 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 CAPSQ13938 189 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 EAPPQ56P03 285 aaPredicted RBP13.77□□□□□ -0.21
CACNB3-219ENST00000551544 SPOCD1Q6ZMY3 1216 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 RELL1Q8IUW5 271 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 RMDN2Q96LZ7 410 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 TMEM121Q9BTD3 319 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 RGPD3A6NKT7 1758 aaPredicted RBP13.77□□□□□ -0.21
CACNB3-219ENST00000551544 RGPD4Q7Z3J3 1758 aa13.77□□□□□ -0.21
CACNB3-219ENST00000551544 COL11A1P12107 1806 aaPredicted RBP13.76□□□□□ -0.21
CACNB3-219ENST00000551544 ADGRA2Q96PE1 1338 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 CFAP73A6NFT4 308 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 FAM47DPA6NHR8 397 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 GOLGA8SH3BPF8 625 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 GOLGA8MH3BSY2 632 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 WEE2P0C1S8 567 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 RIPK1Q13546 671 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 CGB2Q6NT52 195 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 GPAT2Q6NUI2 795 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 PPP1R21Q6ZMI0 780 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 FITM2Q8N6M3 262 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 ALLCQ8N6M5 410 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 MAML1Q92585 1016 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 CAMKK2Q96RR4 588 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 KIF9Q9HAQ2 790 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 ADAMTS5Q9UNA0 930 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 SGK1O00141 431 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 IGF2BP3O00425 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
CACNB3-219ENST00000551544 STAM2O75886 525 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 CALB1P05937 261 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 KRT15P19012 456 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 TAC1P20366 129 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 WDR4P57081 412 aaKnown RBP13.76□□□□□ -0.21
CACNB3-219ENST00000551544 DYNLT1P63172 113 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 IL9RQ01113 521 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 ZBED8Q8IZ13 594 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 PITPNM3Q9BZ71 974 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 EURLQ9NYK6 297 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 KLHL14Q9P2G3 628 aa13.76□□□□□ -0.21
CACNB3-219ENST00000551544 SAE1Q9UBE0 346 aaPredicted RBP13.76□□□□□ -0.21
CACNB3-219ENST00000551544 A0A1B0GUA9 196 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 BANF1O75531 89 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 ASS1P00966 412 aaKnown RBP13.75□□□□□ -0.21
CACNB3-219ENST00000551544 NQO1P15559 274 aaKnown RBP13.75□□□□□ -0.21
CACNB3-219ENST00000551544 GCAP28676 217 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 RXRBP28702 533 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 ZNF132P52740 706 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 COPS2P61201 443 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 GALNTL6Q49A17 601 aa13.75□□□□□ -0.21
CACNB3-219ENST00000551544 CATSPERGQ6ZRH7 1159 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms