RNA–Protein interactions for RNA: ENST00000551434.5

CNOT2-230, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-230ENST00000551434 GRM1Q13255 1194 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 LLGL1Q15334 1064 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 EZH2Q15910 746 aaKnown RBP3.32□□□□□ -1.88
CNOT2-230ENST00000551434 SRSF7Q16629 238 aaKnown RBP eCLIP3.32□□□□□ -1.88
CNOT2-230ENST00000551434 C3orf36Q3SXR2 165 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 PAPD7Q5XG87 772 aaKnown RBP3.32□□□□□ -1.88
CNOT2-230ENST00000551434 SFRP4Q6FHJ7 346 aaPredicted RBP3.32□□□□□ -1.88
CNOT2-230ENST00000551434 SLC4A10Q6U841 1118 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 SLC30A10Q6XR72 485 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 RASAL3Q86YV0 1011 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 SEMA6DQ8NFY4 1073 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 NSUN6Q8TEA1 469 aaKnown RBP3.32□□□□□ -1.88
CNOT2-230ENST00000551434 ATRIPQ8WXE1 791 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 TEKT5Q96M29 485 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 VRK1Q99986 396 aaPredicted RBP3.32□□□□□ -1.88
CNOT2-230ENST00000551434 C1QTNF7Q9BXJ2 289 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 FAM126AQ9BYI3 521 aaPredicted RBP3.32□□□□□ -1.88
CNOT2-230ENST00000551434 SLC13A1Q9BZW2 595 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 SEMA4CQ9C0C4 833 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 WDCPQ9H6R7 721 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 SLC45A2Q9UMX9 530 aa3.32□□□□□ -1.88
CNOT2-230ENST00000551434 ADGRA2Q96PE1 1338 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 MANSC4A6NHS7 340 aaPredicted RBP3.31□□□□□ -1.88
CNOT2-230ENST00000551434 ZNF785A8K8V0 405 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 GABRDO14764 452 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 PCDHGA12O60330 932 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 JTBO76095 146 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 GJB1P08034 283 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 CELA2AP08217 269 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 FAM163BP0C2L3 166 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 NR2F6P10588 404 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 ZFXP17010 805 aaPredicted RBP3.31□□□□□ -1.88
CNOT2-230ENST00000551434 NDUFB7P17568 137 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 CDK11BP21127 795 aaKnown RBP3.31□□□□□ -1.88
CNOT2-230ENST00000551434 ALDH9A1P49189 494 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 CCT8P50990 548 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 ZNF81P51508 661 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 HNRNPMP52272 730 aaKnown RBP eCLIP3.31□□□□□ -1.88
CNOT2-230ENST00000551434 PSMC1P62191 440 aaKnown RBP3.31□□□□□ -1.88
CNOT2-230ENST00000551434 MC2RQ01718 297 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 SNAPC2Q13487 334 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 HABP2Q14520 560 aaPredicted RBP3.31□□□□□ -1.88
CNOT2-230ENST00000551434 ABCB5Q2M3G0 1257 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 CEP85Q6P2H3 762 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 ZNF551Q7Z340 670 aaPredicted RBP3.31□□□□□ -1.88
CNOT2-230ENST00000551434 AMIGO2Q86SJ2 522 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 SCARB1Q8WTV0 552 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 KAT5Q92993 513 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 FKBP10Q96AY3 582 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 FAM136AQ96C01 138 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 LRIG1Q96JA1 1093 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 DMRTA2Q96SC8 542 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 AMBRA1Q9C0C7 1298 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 GPR35Q9HC97 309 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 SERTAD4Q9NUC0 356 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 VSX1Q9NZR4 365 aaPredicted RBP3.31□□□□□ -1.88
CNOT2-230ENST00000551434 RNF7Q9UBF6 113 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 ZDHHC8Q9ULC8 765 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 ST3GAL5Q9UNP4 418 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 PCDHGA9Q9Y5G4 932 aaKnown RBP3.31□□□□□ -1.88
CNOT2-230ENST00000551434 PCDHGA8Q9Y5G5 932 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 PCDHGA7Q9Y5G6 932 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 PCDHGA6Q9Y5G7 932 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 PCDHGA3Q9Y5H0 932 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 RAD54BQ9Y620 910 aa3.31□□□□□ -1.88
CNOT2-230ENST00000551434 COL3A1P02461 1466 aaPredicted RBP3.3□□□□□ -1.88
CNOT2-230ENST00000551434 AOX1Q06278 1338 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 CGB1A6NKQ9 187 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 LINC01548A6NM66 108 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 E9PLN8 166 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 RARBP10826 455 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 LPOP22079 712 aaPredicted RBP3.3□□□□□ -1.88
CNOT2-230ENST00000551434 CERS1P27544 350 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 ITPKBP27987 946 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 CD6P30203 668 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 PIK3CGP48736 1102 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 FXR1P51114 621 aaKnown RBP eCLIP3.3□□□□□ -1.88
CNOT2-230ENST00000551434 ZNF135P52742 658 aaPredicted RBP3.3□□□□□ -1.88
CNOT2-230ENST00000551434 PROK1P58294 105 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 MTMR1Q13613 665 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 KIF22Q14807 665 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 PCBP2Q15366 365 aaKnown RBP eCLIP3.3□□□□□ -1.88
CNOT2-230ENST00000551434 ZNF804AQ7Z570 1209 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 GLCCI1Q86VQ1 547 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 CAMKK1Q8N5S9 505 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 PSD4Q8NDX1 1056 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 TBC1D5Q92609 795 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 MTMR8Q96EF0 704 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 FAM167AQ96KS9 214 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 VKORC1Q9BQB6 163 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 ACTRT3Q9BYD9 372 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 NRIP3Q9NQ35 241 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 ARHGEF3Q9NR81 526 aa3.3□□□□□ -1.88
CNOT2-230ENST00000551434 FEZ2Q9UHY8 353 aaPredicted RBP3.3□□□□□ -1.88
CNOT2-230ENST00000551434 ZNF804BA4D1E1 1349 aa3.29□□□□□ -1.88
CNOT2-230ENST00000551434 TARM1B6A8C7 271 aa3.29□□□□□ -1.88
CNOT2-230ENST00000551434 NT5C1B-RDH14C9J2C7 533 aa3.29□□□□□ -1.88
CNOT2-230ENST00000551434 ONECUT2O95948 504 aa3.29□□□□□ -1.88
CNOT2-230ENST00000551434 HNRNPCP07910 306 aaKnown RBP eCLIP3.29□□□□□ -1.88
CNOT2-230ENST00000551434 ELFN1P0C7U0 828 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms