RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 BTG3Q14201 252 aaPredicted RBP11.09□□□□□ -0.63
NEK3-203ENST00000551355 ASTE1Q2TB18 679 aaPredicted RBP11.09□□□□□ -0.63
NEK3-203ENST00000551355 E4F1Q66K89 784 aaPredicted RBP11.09□□□□□ -0.63
NEK3-203ENST00000551355 SCARA3Q6AZY7 606 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 POTEHQ6S545 545 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 SLC47A2Q86VL8 602 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 ZSCAN30Q86W11 494 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 THEM5Q8N1Q8 247 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 PDCL2Q8N4E4 241 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 OR6B3Q8NGW1 331 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 EPS8L1Q8TE68 723 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 ZNF830Q96NB3 372 aaPredicted RBP11.09□□□□□ -0.63
NEK3-203ENST00000551355 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.09□□□□□ -0.633e-10■■■■□ 19.3
NEK3-203ENST00000551355 ZBED2Q9BTP6 218 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.09□□□□□ -0.63
NEK3-203ENST00000551355 RC3H2Q9HBD1 1191 aaKnown RBP11.09□□□□□ -0.63
NEK3-203ENST00000551355 KCND1Q9NSA2 647 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 NOCTQ9UK39 431 aaKnown RBP11.09□□□□□ -0.63
NEK3-203ENST00000551355 ADAM28Q9UKQ2 775 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 ZMYND8Q9ULU4 1186 aaPredicted RBP11.09□□□□□ -0.63
NEK3-203ENST00000551355 PCDHB8Q9UN66 801 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 L1RE1Q9UN81 338 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 STXBP5LQ9Y2K9 1186 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 CEP83Q9Y592 693 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 CITO14578 2027 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 ATP8B3O60423 1300 aa11.09□□□□□ -0.63
NEK3-203ENST00000551355 SF3B1O75533 1304 aaKnown RBP eCLIP11.09□□□□□ -0.63
NEK3-203ENST00000551355 A8MXQ7 604 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 LSM8O95777 96 aaKnown RBP11.08□□□□□ -0.64
NEK3-203ENST00000551355 GZMAP12544 262 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 MSNP26038 577 aaKnown RBP11.08□□□□□ -0.64
NEK3-203ENST00000551355 PPM1AP35813 382 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 NDST1P52848 882 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 RAD23BP54727 409 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 BCAR1P56945 870 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 HTRA4P83105 476 aaPredicted RBP11.08□□□□□ -0.64
NEK3-203ENST00000551355 MAPRE1Q15691 268 aaKnown RBP11.08□□□□□ -0.64
NEK3-203ENST00000551355 TIGD5Q53EQ6 642 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 ZNF571Q7Z3V5 609 aaPredicted RBP11.08□□□□□ -0.64
NEK3-203ENST00000551355 CRYBG2Q8N1P7 616 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 C3orf58Q8NDZ4 430 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 ZNF606Q8WXB4 792 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 ELMO3Q96BJ8 720 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 HEXIM2Q96MH2 286 aaKnown RBP11.08□□□□□ -0.64
NEK3-203ENST00000551355 ZNF558Q96NG5 402 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 RAD9AQ99638 391 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 MRPL45Q9BRJ2 306 aaKnown RBP11.08□□□□□ -0.64
NEK3-203ENST00000551355 PAAF1Q9BRP4 392 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 SYT11Q9BT88 431 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 ZNF518BQ9C0D4 1074 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 SDCBP2Q9H190 292 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 PDCL3Q9H2J4 239 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 DNAJB4Q9UDY4 337 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 ADAMTS1Q9UHI8 967 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 PCDHGC3Q9UN70 934 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 TTC3P53804 2025 aa11.08□□□□□ -0.64
NEK3-203ENST00000551355 ANK1P16157 1881 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 THAP12O43422 761 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 OAZ2O95190 189 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 PLEKP08567 350 aaPredicted RBP11.07□□□□□ -0.64
NEK3-203ENST00000551355 PNMA6AP0CW24 399 aaPredicted RBP11.07□□□□□ -0.64
NEK3-203ENST00000551355 CD19P15391 556 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 ATP2A2P16615 1042 aaKnown RBP11.07□□□□□ -0.64
NEK3-203ENST00000551355 RAP1GAPP47736 663 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 SLC11A1P49279 550 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 GATMP50440 423 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 EPHB4P54760 987 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 CNGA2Q16280 664 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 PAN2Q504Q3 1202 aaKnown RBP11.07□□□□□ -0.64
NEK3-203ENST00000551355 SGO2Q562F6 1265 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 SPOUT1Q5T280 376 aaKnown RBP11.07□□□□□ -0.64
NEK3-203ENST00000551355 RASIP1Q5U651 963 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 WSCD1Q658N2 575 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 ALKBH5Q6P6C2 394 aaKnown RBP11.07□□□□□ -0.64
NEK3-203ENST00000551355 CD300LGQ6UXG3 332 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 RAD9BQ6WBX8 426 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.07□□□□□ -0.64
NEK3-203ENST00000551355 ZNF662Q6ZS27 426 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 NOP9Q86U38 636 aaKnown RBP11.07□□□□□ -0.64
NEK3-203ENST00000551355 HERC6Q8IVU3 1022 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 FIBCD1Q8N539 461 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 SLC4A11Q8NBS3 891 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 SLC30A5Q8TAD4 765 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 KIAA1524Q8TCG1 905 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 WHAMMQ8TF30 809 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 KBTBD7Q8WVZ9 684 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 DDX1Q92499 740 aaKnown RBP11.07□□□□□ -0.64
NEK3-203ENST00000551355 ACBD6Q9BR61 282 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 TSGA10Q9BZW7 698 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 LHX5Q9H2C1 402 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 CWH43Q9H720 699 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 PUF60Q9UHX1 559 aaKnown RBP11.07□□□□□ -0.64
NEK3-203ENST00000551355 CDH9Q9ULB4 789 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 INTUQ9ULD6 942 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 PRG3Q9Y2Y8 225 aaPredicted RBP11.07□□□□□ -0.64
NEK3-203ENST00000551355 RWDD3Q9Y3V2 267 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 PCDHB12Q9Y5F1 795 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 ADGRG1Q9Y653 693 aa11.07□□□□□ -0.64
NEK3-203ENST00000551355 A0A087X0T9 212 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 H7C4K7 107 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms