RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CD19P15391 556 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 HOXC8P31273 242 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 CHRNA3P32297 505 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 HSPA9P38646 679 aaKnown RBP12.22□□□□□ -0.45
RAB5C-208ENST00000551338 CPT1AP50416 773 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 LACTBP83111 547 aaPredicted RBP12.22□□□□□ -0.45
RAB5C-208ENST00000551338 ZNF200P98182 395 aaPredicted RBP12.22□□□□□ -0.45
RAB5C-208ENST00000551338 PTPN11Q06124 597 aaPredicted RBP12.22□□□□□ -0.45
RAB5C-208ENST00000551338 CRHR2Q13324 411 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 HLTFQ14527 1009 aaKnown RBP eCLIP12.22□□□□□ -0.45
RAB5C-208ENST00000551338 KCTD19Q17RG1 926 aaPredicted RBP12.22□□□□□ -0.45
RAB5C-208ENST00000551338 WDR72Q3MJ13 1102 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 PTPN20Q4JDL3 420 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 PPP1R15BQ5SWA1 713 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 DAB2IPQ5VWQ8 1189 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 TTC27Q6P3X3 843 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 SLC27A1Q6PCB7 646 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 JAMLQ86YT9 394 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 SLC4A11Q8NBS3 891 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 TRPV1Q8NER1 839 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 DNAJB3Q8WWF6 145 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 KIF12Q96FN5 646 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 HPDLQ96IR7 371 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 AP5M1Q9H0R1 490 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 DPH5Q9H2P9 285 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 FAM114A2Q9NRY5 505 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 DPP3Q9NY33 737 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 SNTG2Q9NY99 539 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 DERAQ9Y315 318 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 TLL2Q9Y6L7 1015 aa12.22□□□□□ -0.45
RAB5C-208ENST00000551338 TDRD15B5MCY1 1934 aaKnown RBP12.21□□□□□ -0.45
RAB5C-208ENST00000551338 TSC2P49815 1807 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 MYADML2A6NDP7 307 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 TMEM191CA6NGB0 347 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 TREHO43280 583 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 EIF4BP23588 611 aaKnown RBP12.21□□□□□ -0.45
RAB5C-208ENST00000551338 GGCXP38435 758 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 GSCP56915 257 aaPredicted RBP12.21□□□□□ -0.45
RAB5C-208ENST00000551338 INHBEP58166 350 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 RPL7AP62424 266 aaKnown RBP12.21□□□□□ -0.45
RAB5C-208ENST00000551338 RBP5P82980 135 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 PURAQ00577 322 aaKnown RBP12.21□□□□□ -0.45
RAB5C-208ENST00000551338 CDC42EP1Q00587 391 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 DR1Q01658 176 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 OGDHQ02218 1023 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 INCA1Q0VD86 236 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 ORC1Q13415 861 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 SNX17Q15036 470 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 HSP90B2PQ58FF3 399 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 DUPD1Q68J44 220 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 DNAJC24Q6P3W2 148 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 NOTUMQ6P988 496 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 APBB1IPQ7Z5R6 666 aaPredicted RBP12.21□□□□□ -0.45
RAB5C-208ENST00000551338 TMEM40Q8WWA1 233 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 RIN2Q8WYP3 895 aaPredicted RBP12.21□□□□□ -0.45
RAB5C-208ENST00000551338 MAGOHBQ96A72 148 aaKnown RBP12.21□□□□□ -0.45
RAB5C-208ENST00000551338 C18orf8Q96DM3 657 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 ZMAT2Q96NC0 199 aaKnown RBP12.21□□□□□ -0.45
RAB5C-208ENST00000551338 ZIM3Q96PE6 472 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 RAB17Q9H0T7 212 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 LHX5Q9H2C1 402 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 PARVAQ9NVD7 372 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 TJP2Q9UDY2 1190 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 PCYOX1Q9UHG3 505 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 CYTH4Q9UIA0 394 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 GINS2Q9Y248 185 aa12.21□□□□□ -0.45
RAB5C-208ENST00000551338 C17orf102A2RUQ5 167 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 GOLGA6BA6NDN3 693 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 PPEF2O14830 753 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 MED7O43513 233 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 HSF2BPO75031 334 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 RNF40O75150 1001 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 MICAL2O94851 1124 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 CYBAP13498 195 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 AKR1A1P14550 325 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 AXLP30530 894 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 COILP38432 576 aaPredicted RBP12.2□□□□□ -0.46
RAB5C-208ENST00000551338 FAM193AP78312 1265 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 SREBF2Q12772 1141 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 PCBP1Q15365 356 aaKnown RBP eCLIP12.2□□□□□ -0.46
RAB5C-208ENST00000551338 ZBTB6Q15916 424 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 UBXN11Q5T124 520 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 CYP4A22Q5TCH4 519 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 ALS2CLQ60I27 953 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 CCDC137Q6PK04 289 aaKnown RBP12.2□□□□□ -0.46
RAB5C-208ENST00000551338 ERICH1Q86X53 443 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 RHOT1Q8IXI2 618 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 KATNAL2Q8IYT4 538 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 C3orf20Q8ND61 904 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.2□□□□□ -0.46
RAB5C-208ENST00000551338 PIK3R5Q8WYR1 880 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 TMEM176AQ96HP8 235 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 MCEEQ96PE7 176 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 ZIC5Q96T25 663 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 SH3GL2Q99962 352 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 ERP44Q9BS26 406 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 KATNAL1Q9BW62 490 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 NXF3Q9H4D5 531 aaKnown RBP12.2□□□□□ -0.46
RAB5C-208ENST00000551338 PLEKHA5Q9HAU0 1116 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 VPS18Q9P253 973 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms