RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	CDK2AP1	O14519	115 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TADA2A	O75478	443 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	DKK1	O94907	266 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	KIF4A	O95239	1232 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	APBB3	O95704	486 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MYL4	P12829	197 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	HOXA11	P31270	313 aa	Predicted RBP	6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	RAB33A	Q14088	237 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MAPK6	Q16659	721 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	UGCG	Q16739	394 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	STXBP5	Q5T5C0	1151 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SLC23A3	Q6PIS1	610 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	C1orf228	Q6PIY5	440 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TMPRSS7	Q7RTY8	843 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	RHPN2	Q8IUC4	686 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	GSTCD	Q8NEC7	633 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	RPLP0P6	Q8NHW5	317 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	RLN3	Q8WXF3	142 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	NLRP4	Q96MN2	994 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TMEM209	Q96SK2	561 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	UBAC1	Q9BSL1	405 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MINDY3	Q9H8M7	445 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	PSTPIP2	Q9H939	334 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TRPV4	Q9HBA0	871 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	GPAM	Q9HCL2	828 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	FBRSL1	Q9HCM7	1045 aa	Known RBP	6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	HELLS	Q9NRZ9	838 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	KLK14	Q9P0G3	267 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	STK17A	Q9UEE5	414 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	EBF1	Q9UH73	591 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CEP131	Q9UPN4	1083 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	IPP	Q9Y573	584 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CDY1	Q9Y6F8	540 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SF3B1	O75533	1304 aa	Known RBP eCLIP	6.59	□□□□□ -1.35	3e-6	■■■■■ 37.8
RACGAP1-223	ENST00000551260	ICE1	Q9Y2F5	2266 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	LRBA	P50851	2863 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ARHGEF37	A1IGU5	675 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CASTOR2	A6NHX0	329 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SPDYE3	A6NKU9	549 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ZNF213	O14771	459 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ATG13	O75143	517 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SEC24A	O95486	1093 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	LRG1	P02750	347 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ITPKA	P23677	461 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	AKAP5	P24588	427 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CSRP3	P50461	194 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ATXN3	P54252	364 aa	Predicted RBP	6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	PRKCE	Q02156	737 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	FCHO2	Q0JRZ9	810 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	NMI	Q13287	307 aa	Predicted RBP	6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	UBAP2L	Q14157	1087 aa	Known RBP	6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	DMC1	Q14565	340 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	HSP90AA2P	Q14568	343 aa	Predicted RBP	6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MCMDC2	Q4G0Z9	681 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CEP55	Q53EZ4	464 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	USP39	Q53GS9	565 aa	Known RBP	6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TAF1B	Q53T94	588 aa	Predicted RBP	6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TMEM196	Q5HYL7	178 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	PDXDC1	Q6P996	788 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	PDZD4	Q76G19	769 aa	Predicted RBP	6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	GPR155	Q7Z3F1	870 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	DEFB119	Q8N690	84 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TPCN2	Q8NHX9	752 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SHKBP1	Q8TBC3	707 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	EZH1	Q92800	747 aa	Predicted RBP	6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	FNBP1	Q96RU3	617 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CXCL16	Q9H2A7	254 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SLITRK6	Q9H5Y7	841 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	IFT122	Q9HBG6	1241 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ZBTB40	Q9NUA8	1239 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	DNAAF2	Q9NVR5	837 aa	Known RBP	6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SCHIP1	Q9P0W5	487 aa	Predicted RBP	6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ANKMY1	Q9P2S6	941 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	IL17B	Q9UHF5	180 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	APOBEC2	Q9Y235	224 aa	Known RBP	6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	GTF3C3	Q9Y5Q9	886 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	LRRK2	Q5S007	2527 aa		6.59	□□□□□ -1.35
RACGAP1-223	ENST00000551260	USP9Y	O00507	2555 aa	Predicted RBP	6.59	□□□□□ -1.36
RACGAP1-223	ENST00000551260	TEX51	A0A1B0GUA7	166 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	CAPN8	A6NHC0	703 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	OTOL1	A6NHN0	477 aa	Predicted RBP	6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	MEIS1	O00470	390 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	ZNF197	O14709	1029 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	PSAP	P07602	524 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	MSX1	P28360	303 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	CCR10	P46092	362 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	PLA2G4A	P47712	749 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	ATP1A2	P50993	1020 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	CXADR	P78310	365 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	HNRNPD	Q14103	355 aa	Known RBP	6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	MTERF2	Q49AM1	385 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	SYT13	Q7L8C5	426 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	TTC30A	Q86WT1	665 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	SYT12	Q8IV01	421 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	ARID3B	Q8IVW6	561 aa	Predicted RBP	6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	NAXD	Q8IW45	347 aa		6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	CMTR1	Q8N1G2	835 aa	Known RBP	6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	GTPBP3	Q969Y2	492 aa	Known RBP	6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	RRP36	Q96EU6	259 aa	Known RBP	6.58	□□□□□ -1.36
RACGAP1-223	ENST00000551260	CPB2	Q96IY4	423 aa		6.58	□□□□□ -1.36

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