RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 LPPQ93052 612 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 TMEM176AQ96HP8 235 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 AP1M1Q9BXS5 423 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 AVENQ9NQS1 362 aaPredicted RBP20.94■□□□□ 0.94
SSH1-209ENST00000551165 PTGESO14684 152 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 SPTLC1O15269 473 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 STAU1O95793 577 aaKnown RBP20.94■□□□□ 0.94
SSH1-209ENST00000551165 GHRP10912 638 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 CD52P31358 61 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 SLC7A5Q01650 507 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 PTPN11Q06124 597 aaPredicted RBP20.94■□□□□ 0.94
SSH1-209ENST00000551165 MAMLD1Q13495 774 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 DPH6Q7L8W6 267 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 CD101Q93033 1021 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 CYP3A43Q9HB55 503 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 PCDHGC3Q9UN70 934 aa20.94■□□□□ 0.94
SSH1-209ENST00000551165 CES2O00748 559 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 YY1P25490 414 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 ITIH3Q06033 890 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 RNF14Q9UBS8 474 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 RAB21Q9UL25 225 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 MGEA5O60502 916 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 FKTNO75072 461 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 KCNE1P15382 129 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 MYO1EQ12965 1108 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 CYP4A22Q5TCH4 519 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 RPAINQ86UA6 219 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 C12orf29Q8N999 325 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 FAXDC2Q96IV6 333 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 LPIN3Q9BQK8 851 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 DMGDHQ9UI17 866 aaKnown RBP20.93■□□□□ 0.94
SSH1-209ENST00000551165 UBQLN1Q9UMX0 589 aaKnown RBP20.93■□□□□ 0.94
SSH1-209ENST00000551165 NR2E1Q9Y466 385 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 PTCH2Q9Y6C5 1203 aa20.93■□□□□ 0.94
SSH1-209ENST00000551165 PAEPP09466 180 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 MYBL1P10243 752 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 ITGA4P13612 1032 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 P4HA1P13674 534 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 CYP3A5P20815 502 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 IBSPP21815 317 aaPredicted RBP20.92■□□□□ 0.94
SSH1-209ENST00000551165 PEX5P50542 639 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 C1QBPQ07021 282 aaKnown RBP20.92■□□□□ 0.94
SSH1-209ENST00000551165 INCA1Q0VD86 236 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 RASGEF1CQ8N431 466 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 TMEM35BQ8NCS4 154 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 ACTRT1Q8TDG2 376 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 HEXIM2Q96MH2 286 aaKnown RBP20.92■□□□□ 0.94
SSH1-209ENST00000551165 TRPV6Q9H1D0 765 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 FAM105AQ9NUU6 356 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 PADI3Q9ULW8 664 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 BARX2Q9UMQ3 279 aaPredicted RBP20.92■□□□□ 0.94
SSH1-209ENST00000551165 PIRO00625 290 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 TLR3O15455 904 aaKnown RBP20.92■□□□□ 0.94
SSH1-209ENST00000551165 MYCP01106 439 aaPredicted RBP20.92■□□□□ 0.94
SSH1-209ENST00000551165 RPL7AP62424 266 aaKnown RBP20.92■□□□□ 0.94
SSH1-209ENST00000551165 TUBB4BP68371 445 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 TRIM71Q2Q1W2 868 aaKnown RBP20.92■□□□□ 0.94
SSH1-209ENST00000551165 ZNF618Q5T7W0 954 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 PLEKHA7Q6IQ23 1121 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 ADAT2Q7Z6V5 191 aaKnown RBP20.92■□□□□ 0.94
SSH1-209ENST00000551165 GSTCDQ8NEC7 633 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 SH3TC2Q8TF17 1288 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 RPS6KC1Q96S38 1066 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 SELENOOQ9BVL4 669 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 TMEM59LQ9UK28 342 aa20.92■□□□□ 0.94
SSH1-209ENST00000551165 SPOPO43791 374 aa20.91■□□□□ 0.94
SSH1-209ENST00000551165 LSM8O95777 96 aaKnown RBP20.91■□□□□ 0.94
SSH1-209ENST00000551165 CDH5P33151 784 aaPredicted RBP20.91■□□□□ 0.94
SSH1-209ENST00000551165 SOWAHAQ2M3V2 549 aa20.91■□□□□ 0.94
SSH1-209ENST00000551165 FBXO47Q5MNV8 452 aa20.91■□□□□ 0.94
SSH1-209ENST00000551165 LIN9Q5TKA1 542 aa20.91■□□□□ 0.94
SSH1-209ENST00000551165 TRIM11Q96F44 468 aa20.91■□□□□ 0.94
SSH1-209ENST00000551165 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.91■□□□□ 0.941e-6■■■□□ 17.6
SSH1-209ENST00000551165 O00370 1275 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 MICAL2O94851 1124 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 GRK4P32298 578 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 MLH1P40692 756 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 LPIN1Q14693 890 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 PTPN20Q4JDL3 420 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 CC2D1AQ6P1N0 951 aaPredicted RBP20.9■□□□□ 0.94
SSH1-209ENST00000551165 UBA3Q8TBC4 463 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 VCPIP1Q96JH7 1222 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 RNPC3Q96LT9 517 aaKnown RBP20.9■□□□□ 0.94
SSH1-209ENST00000551165 KRT12Q99456 494 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 ERVK-5Q9HDB9 667 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 MIOSQ9NXC5 875 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 NOD1Q9Y239 953 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 TCRBV5S1A1TA0A578 114 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 PGRMC1O00264 195 aaKnown RBP20.9■□□□□ 0.94
SSH1-209ENST00000551165 FGGP02679 453 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 KLHL7Q8IXQ5 586 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 LRRC52Q8N7C0 313 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 GAD1Q99259 594 aa20.9■□□□□ 0.94
SSH1-209ENST00000551165 HMX1Q9NP08 348 aaPredicted RBP20.9■□□□□ 0.94
SSH1-209ENST00000551165 LLGL1Q15334 1064 aa20.89■□□□□ 0.94
SSH1-209ENST00000551165 ACOT1Q86TX2 421 aa20.89■□□□□ 0.94
SSH1-209ENST00000551165 CALR3Q96L12 384 aaKnown RBP20.89■□□□□ 0.94
SSH1-209ENST00000551165 CPXM1Q96SM3 734 aa20.89■□□□□ 0.94
SSH1-209ENST00000551165 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.89■□□□□ 0.94
SSH1-209ENST00000551165 MYO1FO00160 1098 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms