RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 EIF4BP23588 611 aaKnown RBP12.82□□□□□ -0.36
NR4A1-215ENST00000550557 RARRES1P49788 294 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 PRKCZQ05513 592 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 ASPHQ12797 758 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 SPOPLQ6IQ16 392 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 GPAT2Q6NUI2 795 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.82□□□□□ -0.36
NR4A1-215ENST00000550557 ACOT1Q86TX2 421 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 PBXIP1Q96AQ6 731 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 MYCBPQ99417 103 aaPredicted RBP12.82□□□□□ -0.36
NR4A1-215ENST00000550557 FUT8Q9BYC5 575 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 AGPAT5Q9NUQ2 364 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 BFARQ9NZS9 450 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 PCDHB5Q9Y5E4 795 aa12.82□□□□□ -0.36
NR4A1-215ENST00000550557 A0A087X0B3 334 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 PRR23AA6NEV1 266 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 SMIM22K7EJ46 135 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 CXCL8P10145 99 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 MX2P20592 715 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 IRX4P78413 519 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 ZNF467Q7Z7K2 595 aaPredicted RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 CBWD2Q8IUF1 395 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 ATXN3LQ9H3M9 355 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 TIMM13Q9Y5L4 95 aaPredicted RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 KIF3CO14782 793 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 P4HA2O15460 535 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 FGGP02679 453 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 PSMC6P62333 389 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 GFPT1Q06210 699 aaPredicted RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 DUSP28Q4G0W2 176 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 MMS22LQ6ZRQ5 1243 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 SH3RF1Q7Z6J0 888 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 SCFD1Q8WVM8 642 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 GAD1Q99259 594 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 ZMYND8Q9ULU4 1186 aaPredicted RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 A0A1W2PQJ5 194 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 HMGB1P1B2RPK0 211 aaPredicted RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 E5RI56 91 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 ACKR2O00590 384 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 FGBP02675 491 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 TROVE2P10155 538 aaKnown RBP eCLIP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 GTF2H1P32780 548 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 ZNF177Q13360 481 aaPredicted RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 PPIGQ13427 754 aaKnown RBP eCLIP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 MAP3K21Q5TCX8 1036 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 KLC3Q6P597 504 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 ATPAF2Q8N5M1 289 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 CPA5Q8WXQ8 436 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 RPRD1AQ96P16 312 aaPredicted RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 ERGIC2Q96RQ1 377 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 CATSPERBQ9H7T0 1116 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 LTBP3Q9NS15 1303 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 SYNCRIPO60506 623 aaKnown RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 NDUFV1P49821 464 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 SF3A3Q12874 501 aaKnown RBP eCLIP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 TMTC4Q5T4D3 741 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 TRIM65Q6PJ69 517 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 FRA10AC1Q70Z53 315 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 CTU1Q7Z7A3 348 aaKnown RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 ASAP3Q8TDY4 903 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 CELF4Q9BZC1 486 aaKnown RBP12.81□□□□□ -0.36
NR4A1-215ENST00000550557 PORCNQ9H237 461 aa12.81□□□□□ -0.36
NR4A1-215ENST00000550557 F5H423 210 aaPredicted RBP12.8□□□□□ -0.36
NR4A1-215ENST00000550557 HGSO14964 777 aaPredicted RBP12.8□□□□□ -0.36
NR4A1-215ENST00000550557 FGRP09769 529 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 TWF1Q12792 350 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 PDCLQ13371 301 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 CSGALNACT1Q8TDX6 532 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 DDI1Q8WTU0 396 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 PYROXD1Q8WU10 500 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 SLC5A5Q92911 643 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 RAB3IPQ96QF0 476 aaPredicted RBP12.8□□□□□ -0.36
NR4A1-215ENST00000550557 PURBQ96QR8 312 aaKnown RBP12.8□□□□□ -0.36
NR4A1-215ENST00000550557 UBE2OQ9C0C9 1292 aaKnown RBP12.8□□□□□ -0.36
NR4A1-215ENST00000550557 BAIAP2L1Q9UHR4 511 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 ARFGEF2Q9Y6D5 1785 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 GUCY2CP25092 1073 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 ATICP31939 592 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 SLC8A1P32418 973 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 RBBP5Q15291 538 aaKnown RBP12.8□□□□□ -0.36
NR4A1-215ENST00000550557 CENPUQ71F23 418 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 SLC30A5Q8TAD4 765 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 RNPC3Q96LT9 517 aaKnown RBP12.8□□□□□ -0.36
NR4A1-215ENST00000550557 CIPCQ9C0C6 399 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 DDIT4Q9NX09 232 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 APOL1O14791 398 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 PALMO75781 387 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 WEE1P30291 646 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 TBX2Q13207 712 aaPredicted RBP12.8□□□□□ -0.36
NR4A1-215ENST00000550557 STARD3Q14849 445 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 TTI2Q6NXR4 508 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 OTOP1Q7RTM1 612 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 RAB42Q8N4Z0 105 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 DEPDC1BQ8WUY9 529 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 RUBCNQ92622 972 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 KLHL14Q9P2G3 628 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 TRIM10Q9UDY6 481 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 DDX20Q9UHI6 824 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms