RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 SMTNL2Q2TAL5 461 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 NBPF20Q3BBV1 942 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 UGT3A1Q6NUS8 523 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 C4orf22Q6V702 233 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 MOV10L1Q9BXT6 1211 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 GOLPH3Q9H4A6 298 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 HPDLQ96IR7 371 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 LRRC1Q9BTT6 524 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 GID8Q9NWU2 228 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 KIDINS220Q9ULH0 1771 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 SMAPO00193 183 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 USP10Q14694 798 aaKnown RBP13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 NAB2Q15742 525 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 TADA1Q96BN2 335 aa13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.06□□□□□ -0.32
RAB3IP-212ENST00000550536 SSU72P8A0A1W2PR75 194 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 SERPINI2O75830 405 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 VCAM1P19320 739 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 SPRP35270 261 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 CYTH1Q15438 398 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 ODC1P11926 461 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 MDH1P40925 334 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 CCDC15Q0P6D6 951 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 TMEM62Q0P6H9 643 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 MAFGO15525 162 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 IRF1P10914 325 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 ITGA4P13612 1032 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 CAPRIN2Q6IMN6 1127 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 RBBP8NLQ8NC74 664 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 KRCC1Q9NPI7 259 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 MARCOQ9UEW3 520 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 ATP11BQ9Y2G3 1177 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 MTO1Q9Y2Z2 717 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 LRRIQ3A6PVS8 624 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 NPM3O75607 178 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 NPEPPSP55786 919 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 GOLGA7BQ2TAP0 167 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 ICE2Q659A1 982 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 USP13Q92995 863 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 GPR63Q9BZJ6 419 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 BAZ2AQ9UIF9 1905 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 NCKAP1LP55160 1127 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 PRPF39Q86UA1 669 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 PGBD3Q8N328 593 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 HPS3Q969F9 1004 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 CNOT7Q9UIV1 285 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 DEAF1O75398 565 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 PDHBP11177 359 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 NCAM1P13591 858 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 SGSM3Q96HU1 749 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 A0A1W2PQJ5 194 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 FAM200BP0CF97 657 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 ENO3P13929 434 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 EXOSC10Q01780 885 aaKnown RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 NR1I3Q14994 352 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 VPS37AQ8NEZ2 397 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 YIPF3Q9GZM5 350 aa13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 H2AFY2Q9P0M6 372 aaPredicted RBP13.05□□□□□ -0.32
RAB3IP-212ENST00000550536 RHOBTB3O94955 611 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 MAP3K7CLP57077 242 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 CRAMP1Q96RY5 1269 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 PSTPIP1O43586 416 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 APOA4P06727 396 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 MRPS15P82914 257 aaKnown RBP13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 RABGAP1LQ5R372 815 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 KCTD17Q8N5Z5 321 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 SLITRK1Q96PX8 696 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 USP42Q9H9J4 1324 aaKnown RBP13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 GUCA1CO95843 209 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 MUTP22033 750 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 GALCP54803 685 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 MAPRE1Q15691 268 aaKnown RBP13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 GLB1LQ6UWU2 654 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 EFL1Q7Z2Z2 1120 aaKnown RBP13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 TEX9Q8N6V9 391 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 RPS6KA5O75582 802 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 MYBP10242 640 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 LONP2Q86WA8 852 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 CINPQ9BW66 212 aaPredicted RBP13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 SLC30A1Q9Y6M5 507 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 SLC2A3P11169 496 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 KCNK16Q96T55 309 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 FAM167BQ9BTA0 163 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 A0A1B0GW55 424 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 DUX4L2P0CJ85 424 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 DUX4L3P0CJ86 424 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 DUX4L4P0CJ87 422 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 DUX4L5P0CJ88 424 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 DUX4L6P0CJ89 424 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 DUX4L7P0CJ90 424 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 MTF1Q14872 753 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 AGBL2Q5U5Z8 902 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 AGGF1Q8N302 714 aaeCLIP13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 BRD8Q9H0E9 1235 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 DUX4Q9UBX2 424 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 MORC2Q9Y6X9 1032 aaPredicted RBP13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 FOXN1O15353 648 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 EFCAB12Q6NXP0 572 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms