RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 RSPO4Q2I0M5 234 aaPredicted RBP23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 ZC2HC1CQ53FD0 456 aaPredicted RBP23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 C1orf228Q6PIY5 440 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 BRAPQ7Z569 592 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 CSGALNACT1Q8TDX6 532 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 SECISBP2LQ93073 1101 aaKnown RBP23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 LRRC3BQ96PB8 259 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 CCSER1Q9C0I3 900 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 ATXN3LQ9H3M9 355 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 C8orf33Q9H7E9 229 aaPredicted RBP23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 C2CD2Q9Y426 696 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 NCOR2Q9Y618 2525 aa23.49■■□□□ 1.35
SMARCC2-210ENST00000550519 TISP43B9A030 160 aa23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 GABRR2P28476 465 aa23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 DDIT3P35638 169 aa23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 POU5F1Q01860 360 aaKnown RBP23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 SF3A1Q15459 793 aaKnown RBP23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 ADALQ6DHV7 355 aa23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 SLFN12LQ6IEE8 588 aa23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 ITIH5Q86UX2 942 aa23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 RASSF8Q8NHQ8 419 aa23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 ZCWPW1Q9H0M4 648 aa23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 OBP2AQ9NY56 170 aa23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 DSEQ9UL01 958 aa23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 TICRRQ7Z2Z1 1910 aa23.48■■□□□ 1.35
SMARCC2-210ENST00000550519 TGM1P22735 817 aa23.47■■□□□ 1.35
SMARCC2-210ENST00000550519 WEE1P30291 646 aa23.47■■□□□ 1.35
SMARCC2-210ENST00000550519 TUFMP49411 452 aaKnown RBP23.47■■□□□ 1.35
SMARCC2-210ENST00000550519 SLC39A12Q504Y0 691 aa23.47■■□□□ 1.35
SMARCC2-210ENST00000550519 GPIHBP1Q8IV16 184 aa23.47■■□□□ 1.35
SMARCC2-210ENST00000550519 AGO2Q9UKV8 859 aaKnown RBP23.47■■□□□ 1.35
SMARCC2-210ENST00000550519 MYBPHLA2RUH7 354 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 SLC38A8A6NNN8 435 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 CYB561D2O14569 222 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 CXCL12P48061 93 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 SOX9P48436 509 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 KPNA1P52294 538 aaPredicted RBP23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 SATB1Q01826 763 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 WDR44Q5JSH3 913 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 GPR158Q5T848 1215 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 ZNF720Q7Z2F6 126 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 SPEM1Q8N4L4 309 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 SEPT5Q99719 369 aaPredicted RBP23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 LPIN3Q9BQK8 851 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 IL21Q9HBE4 155 aa23.46■■□□□ 1.35
SMARCC2-210ENST00000550519 DPYSL4O14531 572 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 ATF6P18850 670 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 TAF6P49848 677 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 ARHGAP29Q52LW3 1261 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 ARHGAP15Q53QZ3 475 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 TXNDC11Q6PKC3 985 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 CRELD2Q6UXH1 353 aaPredicted RBP23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 LRRTM3Q86VH5 581 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 RALGPS2Q86X27 583 aaPredicted RBP23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 METTL23Q86XA0 190 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 CELF5Q8N6W0 485 aaKnown RBP23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 KRI1Q8N9T8 703 aaKnown RBP23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 EPSTI1Q96J88 318 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 IKZF4Q9H2S9 585 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 TASP1Q9H6P5 420 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 DPP3Q9NY33 737 aa23.45■■□□□ 1.34
SMARCC2-210ENST00000550519 SPECC1L-ADORA2AF8WAN1 911 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 PPP1R37O75864 691 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 SDHBP21912 280 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 ADSSP30520 456 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 CTHP32929 405 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 SMARCB1Q12824 385 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 LRRC32Q14392 662 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 VEPH1Q14D04 833 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 MGAT5BQ3V5L5 792 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 USP49Q70CQ1 688 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 EFCAB13Q8IY85 973 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 THEM5Q8N1Q8 247 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 C2orf15Q8WU43 125 aaKnown RBP23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 HVCN1Q96D96 273 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 ZFYVE19Q96K21 471 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 PYM1Q9BRP8 204 aaKnown RBP23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 STRA6Q9BX79 667 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 RBM12Q9NTZ6 932 aaKnown RBP23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 GTSE1Q9NYZ3 720 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 GMEB2Q9UKD1 530 aa23.44■■□□□ 1.34
SMARCC2-210ENST00000550519 PRR5-ARHGAP8B1AHC4 643 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 PAPSS2O95340 614 aaPredicted RBP23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 PRAMEF12O95522 483 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 CDC25CP30307 473 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 CDR1P51861 262 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 ARHGAP8P85298 464 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 CYP4F8P98187 520 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 LMNB2Q03252 620 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 DGKKQ5KSL6 1271 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 WSCD1Q658N2 575 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 SFR1Q86XK3 245 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 FAM200AQ8TCP9 573 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 SPPL2BQ8TCT7 592 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 BPIFB1Q8TDL5 484 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 UPF2Q9HAU5 1272 aaKnown RBP23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 PARD6AQ9NPB6 346 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 TSC2P49815 1807 aa23.43■■□□□ 1.34
SMARCC2-210ENST00000550519 SCN1AP35498 2009 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms