RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 MREGQ8N565 214 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 EML4Q9HC35 981 aaKnown RBP16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 AHCYL1O43865 530 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 PSMC3P17980 439 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 CAPRIN1Q14444 709 aaKnown RBP16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 LRRC74BQ6ZQY2 392 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 DDIASQ8IXT1 998 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 PCYOX1LQ8NBM8 494 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 DAGLBQ8NCG7 672 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 CDC26Q8NHZ8 85 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 SPATA18Q8TC71 538 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 TMEM120AQ9BXJ8 343 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 TAGLN3Q9UI15 199 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 SNX3O60493 162 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 DGKIO75912 1065 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 CACNB3P54284 484 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 MROH9Q5TGP6 573 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 ITPRIPL1Q6GPH6 555 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 BTBD10Q9BSF8 475 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 CD209Q9NNX6 404 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 HERC5Q9UII4 1024 aaKnown RBP16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 ATP9BO43861 1147 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 HSPA1AP0DMV8 641 aaKnown RBP16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 HSPA1BP0DMV9 641 aaKnown RBP16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 NUDT2P50583 147 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 ZNF543Q08ER8 600 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 TRADDQ15628 312 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 FAM47CQ5HY64 1035 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 RTKN2Q8IZC4 609 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 PGBD4Q96DM1 585 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 SALL1Q9NSC2 1324 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 GPC3P51654 580 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 PLOD1Q02809 727 aaPredicted RBP16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 EFHC1Q5JVL4 640 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 PRUNE1Q86TP1 453 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 IFNEQ86WN2 208 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 TMPRSS6Q8IU80 811 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 CLEC4FQ8N1N0 589 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 C1orf131Q8NDD1 294 aaKnown RBP16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 JADE3Q92613 823 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 KCND2Q9NZV8 630 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 WDR35Q9P2L0 1181 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 MEGF6O75095 1541 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 ITSN1Q15811 1721 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 A8MXQ7 604 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 OPLAHO14841 1288 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 ERMARDQ5T6L9 678 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 WLSQ5T9L3 541 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 PLD3Q8IV08 490 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 COA1Q9GZY4 146 aa16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 CPSF3Q9UKF6 684 aaKnown RBP16.52■□□□□ 0.24
RBFOX1-212ENST00000550418 SPDYE2BA6NHP3 402 aa16.52■□□□□ 0.23
RBFOX1-212ENST00000550418 SPDYE6P0CI01 402 aa16.52■□□□□ 0.23
RBFOX1-212ENST00000550418 AP3M2P53677 418 aa16.52■□□□□ 0.23
RBFOX1-212ENST00000550418 ROR2Q01974 943 aaKnown RBP16.52■□□□□ 0.23
RBFOX1-212ENST00000550418 TSTA3Q13630 321 aaPredicted RBP16.52■□□□□ 0.23
RBFOX1-212ENST00000550418 DUOXA2Q1HG44 320 aa16.52■□□□□ 0.23
RBFOX1-212ENST00000550418 ZNF786Q8N393 782 aa16.52■□□□□ 0.23
RBFOX1-212ENST00000550418 ZNF555Q8NEP9 628 aa16.52■□□□□ 0.23
RBFOX1-212ENST00000550418 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.23
RBFOX1-212ENST00000550418 SLC24A2Q9UI40 661 aa16.52■□□□□ 0.23
RBFOX1-212ENST00000550418 SNX2O60749 519 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 CYP11B2P19099 503 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 OR9Q1Q8NGQ5 310 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 MPP4Q96JB8 637 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 CDYLQ9Y232 598 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 PXDNQ92626 1479 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 FAM196BA6NMK8 535 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 FRMD8Q9BZ67 464 aaPredicted RBP16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 ASPSCR1Q9BZE9 553 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 CYP39A1Q9NYL5 469 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 KIF17Q9P2E2 1029 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 GABBR1Q9UBS5 961 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 SRP72O76094 671 aaKnown RBP16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 SERPINB8P50452 374 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 AQP5P55064 265 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 NUP107P57740 925 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 NFIXQ14938 502 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 OASLQ15646 514 aaKnown RBP16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 ZNF568Q3ZCX4 644 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 EPC2Q52LR7 807 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 SPDYCQ5MJ68 293 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 ACAD10Q6JQN1 1059 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 RMDN2Q96LZ7 410 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 TRAPPC9Q96Q05 1148 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 SLC12A6Q9UHW9 1150 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 STAP1Q9ULZ2 295 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 FAM237AA0A1B0GTK4 181 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 CBX6O95503 412 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 NPR1P16066 1061 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 ADRA2BP18089 450 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 SPRP35270 261 aaPredicted RBP16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 FOXD4Q12950 439 aaPredicted RBP16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 FEZF2Q8TBJ5 459 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 ZNF184Q99676 751 aaPredicted RBP16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 MYLK2Q9H1R3 596 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 BTBD7Q9P203 1132 aa16.51■□□□□ 0.23
RBFOX1-212ENST00000550418 RAD17O75943 681 aa16.5■□□□□ 0.23
RBFOX1-212ENST00000550418 S100A5P33763 92 aa16.5■□□□□ 0.23
RBFOX1-212ENST00000550418 ZNF677Q86XU0 584 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms